Evidence map›Paper›PMID 28160601›Full record

ArticleNucleic acids research2017

The structure and function of an RNA polymerase interaction domain in the PcrA/UvrD helicase.

Kelly Sanders, Chia-Liang Lin, Abigail J Smith, Nora Cronin, Gemma Fisher, Vasileios Eftychidis, Peter McGlynn, Nigel J Savery, Dale B Wigley, Mark S Dillingham

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Structural basis for dimerization and activation of UvrD-family helicases.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  11. Article
  12. Review
  13. Article
  14. Cells · 2021
    Article
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Kelly SandersDNA:Protein Interactions Unit, School of Biochemistry, Biomedical Sciences Building, University of Bristol, Bristol BS8 1TD, UK.
Chia-Liang LinInstitute of Cancer Research, Chester Beatty Laboratories, 237 Fulham Road, London SW3 6JB, UK and Section of Structural Biology, Department of Medicine, Imperial College London, South Kensington Campus, London SW7 2AZ, UK.
Abigail J SmithDNA:Protein Interactions Unit, School of Biochemistry, Biomedical Sciences Building, University of Bristol, Bristol BS8 1TD, UK.
Nora CroninInstitute of Cancer Research, Chester Beatty Laboratories, 237 Fulham Road, London SW3 6JB, UK and Section of Structural Biology, Department of Medicine, Imperial College London, South Kensington Campus, London SW7 2AZ, UK.
Gemma FisherDNA:Protein Interactions Unit, School of Biochemistry, Biomedical Sciences Building, University of Bristol, Bristol BS8 1TD, UK.
Vasileios EftychidisDepartment of Biology, University of York, Wentworth Way, York YO10 5DD, UK.
Peter McGlynnDepartment of Biology, University of York, Wentworth Way, York YO10 5DD, UK.
Nigel J SaveryDNA:Protein Interactions Unit, School of Biochemistry, Biomedical Sciences Building, University of Bristol, Bristol BS8 1TD, UK.
Dale B WigleyInstitute of Cancer Research, Chester Beatty Laboratories, 237 Fulham Road, London SW3 6JB, UK and Section of Structural Biology, Department of Medicine, Imperial College London, South Kensington Campus, London SW7 2AZ, UK.
Mark S DillinghamDNA:Protein Interactions Unit, School of Biochemistry, Biomedical Sciences Building, University of Bristol, Bristol BS8 1TD, UK.
University of Bristol · GBInstitute of Cancer Research · GBUniversity of York · GB

Funding

Biotechnology and Biological Sciences Research Council BB/I001859/1Cancer Research UK 12799Medical Research Council MR/N009258/1
6 · The paper itself

Abstract

The PcrA/UvrD helicase functions in multiple pathways that promote bacterial genome stability including the suppression of conflicts between replication and transcription and facilitating the repair of transcribed DNA. The reported ability of PcrA/UvrD to bind and backtrack RNA polymerase (1,2) might be relevant to these functions, but the structural basis for this activity is poorly understood. In this work, we define a minimal RNA polymerase interaction domain in PcrA, and report its crystal structure at 1.5 Å resolution. The domain adopts a Tudor-like fold that is similar to other RNA polymerase interaction domains, including that of the prototype transcription-repair coupling factor Mfd. Removal or mutation of the interaction domain reduces the ability of PcrA/UvrD to interact with and to remodel RNA polymerase complexes in vitro. The implications of this work for our understanding of the role of PcrA/UvrD at the interface of DNA replication, transcription and repair are discussed.

Indexed as

Amino AcidsBacterial ProteinsDNA-Directed RNA PolymerasesDNA HelicasesGeobacillus stearothermophilusModels, MolecularProtein BindingTranscription Elongation, GeneticTudor DomainAmino AcidsBacterial ProteinsDNA-Directed RNA PolymerasesDNA HelicasespcrA protein, Bacteria

Identifiers

PMID28160601
PMCPMC5397179
OpenAlexW2584351644

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.