Evidence map›Paper›PMID 28159788›Full record

ArticleApplied and environmental microbiology2017

Revisiting the Regulation of the Primary Scaffoldin Gene in Clostridium thermocellum.

Lizett Ortiz de Ora, Iván Muñoz-Gutiérrez, Edward A Bayer, Yuval Shoham, Raphael Lamed, Ilya Borovok

Open access · bronzeAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Applied and environmental microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Unique Fn3-like biosensor in σProtein science : a publication of the Protein Society · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Lizett Ortiz de OraDepartment of Molecular Microbiology and Biotechnology, Tel Aviv University, Tel Aviv, Israel.
Iván Muñoz-GutiérrezDepartment of Molecular Microbiology and Biotechnology, Tel Aviv University, Tel Aviv, Israel.
Edward A BayerDepartment of Biomolecular Sciences, The Weizmann Institute of Science, Rehovot, Israel.
Yuval ShohamDepartment of Biotechnology and Food Engineering, Technion-IIT, Haifa, Israel.
Raphael LamedDepartment of Molecular Microbiology and Biotechnology, Tel Aviv University, Tel Aviv, Israel lamedr@post.tau.ac.il IlyaBo@tauex.tau.ac.il.
Ilya BorovokDepartment of Molecular Microbiology and Biotechnology, Tel Aviv University, Tel Aviv, Israel lamedr@post.tau.ac.il IlyaBo@tauex.tau.ac.il.
Tel Aviv University · ILTechnion – Israel Institute of Technology · ILWeizmann Institute of Science · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cellulosomes are considered to be one of the most efficient systems for the degradation of plant cell wall polysaccharides. The central cellulosome component comprises a large, noncatalytic protein subunit called scaffoldin. Multiple saccharolytic enzymes are incorporated into the scaffoldins via specific high-affinity cohesin-dockerin interactions. Recently, the regulation of genes encoding certain cellulosomal components by multiple RNA polymerase alternative σ

Indexed as

Gene Expression Regulation, Bacterial5' Untranslated RegionsAcetivibrio thermocellusBacterial ProteinsCarrier ProteinsCelluloseCellulosomesHydrolysisPromoter Regions, GeneticSigma FactorTranscription Initiation Site5' Untranslated RegionsBacterial ProteinsCarrier ProteinsCellulosecellulose binding protein A, Clostridium cellulovoransSigma Factor5′-UTRcellulosomecipAClostridium thermocellumgene regulationpromotersscaffoldinsigma factors

Identifiers

PMID28159788
PMCPMC5377506
OpenAlexW2586031827

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.