Evidence map›Paper›PMID 28158275›Full record

ArticlePLoS pathogens2017

Early endonuclease-mediated evasion of RNA sensing ensures efficient coronavirus replication.

Eveline Kindler, Cristina Gil-Cruz, Julia Spanier, Yize Li, Jochen Wilhelm, Huib H Rabouw, Roland Züst, Mihyun Hwang, Philip V'kovski, Hanspeter Stalder and 15 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04672291 (A Phase I-Ib, Double-blinded, Randomized Repeated Dose Single Center, Safety and Immunogenicity Study of Nasal Poly-ICLC), which is not on this map. Cited by 165 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
165citing papers in PubMed, 1 pooled it
10.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04672291 phase1completednot on this mapstarted 2021, after this paper: background citation

A Phase I-Ib, Double-blinded, Randomized Repeated Dose Single Center, Safety and Immunogenicity Study of Nasal Poly-ICLC (Hiltonol®) in Healthy COVID-19 Vaccinated Adults

TypeinterventionalSponsorOncovir, Inc.Ran2021 to 2023Enrolled43ConditionsCOVID - 19ArmsPoly-ICLC (Hiltonol®) or Placebo
3 · Its place in the literature

Who cites it

165 citing papers in PubMed, 1 synthesis or guideline pooled it, 245 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
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  7. Article
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  13. Review
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  15. Article
  16. SARS-CoV-2 nsp15 enhances viral virulence by subverting host antiviral defenses.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  17. Article
  18. Human coronaviruses: activation and antagonism of innate immune responses.Microbiology and molecular biology reviews : MMBR · 2025
    Review
  19. Coronavirus endoribonuclease antagonizes ZBP1-mediated necroptosis and delays multiple cell death pathways.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  20. Article

105 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 13 institutions in 5 countries.

Eveline KindlerDepartment of Infectious Diseases and Pathobiology, University of Bern, Bern, Switzerland.
Cristina Gil-CruzInstitute of Immunobiology, Kantonsspital St.Gallen, St.Gallen, Switzerland.
Julia SpanierInstitute for Experimental Infection Research, TWINCORE, Centre for Experimental and Clinical Infection Research, a joint venture between the Helmholtz Centre for Infection Research and the Hannover Medical School, Hannover, Germany.
Yize LiDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States of America.
Jochen WilhelmUniversities Giessen & Marburg Lung Center (UGMLC), Deutsches Zentrum für Lungenforschung (DZL), Giessen, Germany.
Huib H RabouwVirology Division, Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.
Roland ZüstSingapore Immunology Network, Singapore.
Mihyun HwangDepartment of Neurosciences, Lerner Research Institute, Cleveland Clinic Foundation, Cleveland, Ohio, United States of America.ORCID 0000-0003-2639-0265
Philip V'kovskiDepartment of Infectious Diseases and Pathobiology, University of Bern, Bern, Switzerland.ORCID 0000-0002-8366-1220
Hanspeter StalderDepartment of Infectious Diseases and Pathobiology, University of Bern, Bern, Switzerland.ORCID 0000-0003-0763-6469
Sabrina MartiDepartment of Infectious Diseases and Pathobiology, University of Bern, Bern, Switzerland.
Matthias HabjanMax-Planck-Institute of Biochemistry, Martinsried, Germany.
Luisa Cervantes-BarraganWashington University School of Medicine, St. Louis, MO, USA.
Ruth ElliotDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States of America.
Nadja KarlInstitute for Medical Virology, Justus-Liebig-University, Giessen, Germany.
Christina GaughanDepartment of Cancer Biology, Lerner Research Institute, Cleveland, Ohio, United States of America.
Frank J M van KuppeveldVirology Division, Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.ORCID 0000-0001-5800-749X
Robert H SilvermanDepartment of Cancer Biology, Lerner Research Institute, Cleveland, Ohio, United States of America.
Markus KellerInstitute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany.
Burkhard LudewigInstitute of Immunobiology, Kantonsspital St.Gallen, St.Gallen, Switzerland.
Cornelia C BergmannDepartment of Neurosciences, Lerner Research Institute, Cleveland Clinic Foundation, Cleveland, Ohio, United States of America.
John ZiebuhrInstitute for Medical Virology, Justus-Liebig-University, Giessen, Germany.
Susan R WeissDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States of America.ORCID 0000-0002-8155-4528
Ulrich KalinkeInstitute for Experimental Infection Research, TWINCORE, Centre for Experimental and Clinical Infection Research, a joint venture between the Helmholtz Centre for Infection Research and the Hannover Medical School, Hannover, Germany.
Volker ThielDepartment of Infectious Diseases and Pathobiology, University of Bern, Bern, Switzerland.ORCID 0000-0002-5783-0887
University of Bern · CHUniversity of Pennsylvania · USCleveland Clinic · USCleveland Clinic Lerner College of Medicine · USJustus-Liebig-Universität Gießen · DEKantonsspital St. Gallen · CHMedizinische Hochschule Hannover · DEUtrecht University · NLFriedrich-Loeffler-Institut · DEGerman Center for Lung Research · DEMax Planck Institute of Biochemistry · DESingapore Immunology Network · SGWashington University in St. Louis · US

Funding

Control of Viral Pathogenesis by Regulation of 2-5A LevelsR01AI104887 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI SILVERMAN, ROBERT H., WEISS, SUSAN R · 2013 to 2023
$7.6M
REGULATION OF 2-5A-DEPENDENT RNASE LEVELS OF INTERFERONR01CA044059 · NCI · HENRY M. JACKSON FDN FOR THE ADV MIL/MED · PI SILVERMAN, ROBERT H. · 1986 to 2015
$6.1M
Murine coronavirus neurovirulence: role of type I interferon responseR01NS081008 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI WEISS, SUSAN R · 2012 to 2016
$1.7M
NCI NIH HHS R01 CA044059NIAID NIH HHS R01 AI104887NINDS NIH HHS R01 NS081008
6 · The paper itself

Abstract

Coronaviruses are of veterinary and medical importance and include highly pathogenic zoonotic viruses, such as SARS-CoV and MERS-CoV. They are known to efficiently evade early innate immune responses, manifesting in almost negligible expression of type-I interferons (IFN-I). This evasion strategy suggests an evolutionary conserved viral function that has evolved to prevent RNA-based sensing of infection in vertebrate hosts. Here we show that the coronavirus endonuclease (EndoU) activity is key to prevent early induction of double-stranded RNA (dsRNA) host cell responses. Replication of EndoU-deficient coronaviruses is greatly attenuated in vivo and severely restricted in primary cells even during the early phase of the infection. In macrophages we found immediate induction of IFN-I expression and RNase L-mediated breakdown of ribosomal RNA. Accordingly, EndoU-deficient viruses can retain replication only in cells that are deficient in IFN-I expression or sensing, and in cells lacking both RNase L and PKR. Collectively our results demonstrate that the coronavirus EndoU efficiently prevents simultaneous activation of host cell dsRNA sensors, such as Mda5, OAS and PKR. The localization of the EndoU activity at the site of viral RNA synthesis-within the replicase complex-suggests that coronaviruses have evolved a viral RNA decay pathway to evade early innate and intrinsic antiviral host cell responses.

Indexed as

AnimalsCoronaviridaeCoronavirus InfectionsEndonucleasesEnzyme-Linked Immunosorbent AssayFlow CytometryHost-Pathogen InteractionsHumansImmune EvasionImmunity, InnateMiceMice, Inbred C57BLReal-Time Polymerase Chain ReactionViral ProteinsEndonucleasesViral Proteins

Identifiers

PMID28158275
PMCPMC5310923
OpenAlexW2584597755

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.