Evidence map›Paper›PMID 28157540›Full record

ArticleAmerican journal of human genetics2017

Large Intragenic Deletion in DSTYK Underlies Autosomal-Recessive Complicated Spastic Paraparesis, SPG23.

John Y W Lee, Chao-Kai Hsu, Magdalene Michael, Arti Nanda, Lu Liu, James R McMillan, Celine Pourreyron, Takuya Takeichi, Jakub Tolar, Evan Reid and 16 more

Open access · hybridAbstract readCase Reports
In one paragraph

Article in American journal of human genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Functions of the RIP kinase family members in the skin.Cellular and molecular life sciences : CMLS · 2023
    Review
  5. Article
  6. Hereditary Spastic Paraplegia: An Update.International journal of molecular sciences · 2022
    Review
  7. Article
  8. Article
  9. Importance of lipids for upper motor neuron health and disease.Seminars in cell & developmental biology · 2021
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. DSTYK Promotes Metastasis and ChemoresistanceFrontiers in pharmacology · 2020
    Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 13 institutions in 6 countries.

John Y W LeeSt John's Institute of Dermatology, King's College London (Guy's Campus), London SE1 9RT, UK.
Chao-Kai HsuDepartment of Dermatology, National Cheng Kung University Hospital, College of Medicine, National Cheng Kung University, Tainan 701, Taiwan; Institute of Clinical Medicine, College of Medicine, National Cheng Kung University, Tainan 701, Taiwan.
Magdalene MichaelRandall Division of Cell and Molecular Biophysics, King's College London (Guy's Campus), London SE1 9RT, UK.
Arti NandaAs'ad Al-Hamad Dermatology Center, Al-Sabah Hospital, Kuwait City 13001, Kuwait.
Lu LiuThe National Diagnostic EB Laboratory, Viapath, St Thomas' Hospital, London SE1 7EH, UK.
James R McMillanThe National Diagnostic EB Laboratory, Viapath, St Thomas' Hospital, London SE1 7EH, UK.
Celine PourreyronJacqui Wood Cancer Centre, University of Dundee, Ninewells Hospital and Medical School, Dundee DD1 9SY, UK.
Takuya TakeichiSt John's Institute of Dermatology, King's College London (Guy's Campus), London SE1 9RT, UK; Department of Dermatology, Nagoya University Graduate School of Medicine, Nagoya 466-8560, Japan.
Jakub TolarDepartment of Pediatrics, Division of Blood and Marrow Transplantation, University of Minnesota, Minneapolis, MN 55455, USA; Stem Cell Institute, University of Minnesota, Minneapolis, MN 55455, USA.
Evan ReidCambridge Institute for Medical Research (CIMR), University of Cambridge, Cambridge CB2 0XY, UK; Department of Medical Genetics, Addenbrooke's Hospital, University of Cambridge, Cambridge CB2 0QQ, UK.
Thomas HaydayRandall Division of Cell and Molecular Biophysics, King's College London (Guy's Campus), London SE1 9RT, UK.
Sergiu C BlumenDepartment of Neurology, Hillel Yaffe Medical Center, Hadera 38100, Israel; Rappaport Faculty of Medicine, Technion, Israel Institute of Technology, Haifa 3525433, Israel.
Saif Abu-MouchLiver Unit, Department of Internal Medicine B, Hillel Yaffe Medical Center, Hadera 38100, Israel.
Rachel StraussbergNeurogenetic Service, Neurology Institute, Schneider Children's Medical Center, Petah Tikva 49202, Israel; Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv 69978, Israel.
Lina Basel-VanagaiteSackler Faculty of Medicine, Tel Aviv University, Tel Aviv 69978, Israel; Raphael Recanati Genetic Institute, Rabin Medical Center, Beilinson Campus, Petah Tikva 49100, Israel; Pediatric Genetics Unit, Schneider Children's Medical Center, Petah Tikva 49202, Israel; Felsenstein Medical Research Center, Rabin Medical Center, Petah Tikva 4941492, Israel.
Yael BarhumLaboratory of Clinical Neuroscience, Felsenstein Medical Research Center, Rabin Medical Center, Petah Tikva 4941492, Israel; Department of Neurology, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv 69978, Israel.
Yasmin ZouabiNeurogenetic Service, Neurology Institute, Schneider Children's Medical Center, Petah Tikva 49202, Israel.
Hejab Al-AjmiAs'ad Al-Hamad Dermatology Center, Al-Sabah Hospital, Kuwait City 13001, Kuwait.
Hsin-Yu HuangDepartment of Dermatology, National Cheng Kung University Hospital, College of Medicine, National Cheng Kung University, Tainan 701, Taiwan.
Ting-Chien LinDepartment of Dermatology, National Cheng Kung University Hospital, College of Medicine, National Cheng Kung University, Tainan 701, Taiwan.
Masashi AkiyamaDepartment of Dermatology, Nagoya University Graduate School of Medicine, Nagoya 466-8560, Japan.
Julia Y Y LeeDepartment of Dermatology, National Cheng Kung University Hospital, College of Medicine, National Cheng Kung University, Tainan 701, Taiwan.
W H Irwin McLeanCentre for Dermatology and Genetic Medicine, Division of Molecular Medicine, University of Dundee, Dundee DD1 5EH, UK.
Michael A SimpsonDepartment of Medical and Molecular Genetics, King's College London, School of Medicine, Guy's Hospital, London SE1 9RT, UK.
Maddy ParsonsRandall Division of Cell and Molecular Biophysics, King's College London (Guy's Campus), London SE1 9RT, UK.
John A McGrathSt John's Institute of Dermatology, King's College London (Guy's Campus), London SE1 9RT, UK; Centre for Dermatology and Genetic Medicine, Division of Molecular Medicine, University of Dundee, Dundee DD1 5EH, UK. Electronic address: john.mcgrath@kcl.ac.uk.
King's College London · GBNational Cheng Kung University Hospital · TWAl-Sabah Hospital · KWHillel Yaffe Medical Center · ILSt Thomas' Hospital · GBTel Aviv University · ILNagoya University · JPNinewells Hospital · GBRabin Medical Center · ILSchneider Children's Medical Center · ILUniversity of Cambridge · GBUniversity of Dundee · GBUniversity of Minnesota · US

Funding

Medical Research Council G0802780Medical Research Council MR/M00046X/1Medical Research Council MR/M018512/1Wellcome Trust
6 · The paper itself

Abstract

SPG23 is an autosomal-recessive neurodegenerative subtype of lower limb spastic paraparesis with additional diffuse skin and hair dyspigmentation at birth followed by further patchy pigment loss during childhood. Previously, genome-wide linkage in an Arab-Israeli pedigree mapped the gene to an approximately 25 cM locus on chromosome 1q24-q32. By using whole-exome sequencing in a further Palestinian-Jordanian SPG23 pedigree, we identified a complex homozygous 4-kb deletion/20-bp insertion in DSTYK (dual serine-threonine and tyrosine protein kinase) in all four affected family members. DSTYK is located within the established linkage region and we also found the same mutation in the previously reported pedigree and another Israeli pedigree (total of ten affected individuals from three different families). The mutation removes the last two exons and part of the 3' UTR of DSTYK. Skin biopsies revealed reduced DSTYK protein levels along with focal loss of melanocytes. Ultrastructurally, swollen mitochondria and cytoplasmic vacuoles were also noted in remaining melanocytes and some keratinocytes and fibroblasts. Cultured keratinocytes and fibroblasts from an affected individual, as well as knockdown of Dstyk in mouse melanocytes, keratinocytes, and fibroblasts, were associated with increased cell death after ultraviolet irradiation. Keratinocytes from an affected individual showed loss of kinase activity upon stimulation with fibroblast growth factor. Previously, dominant mutations in DSTYK were implicated in congenital urological developmental disorders, but our study identifies different phenotypic consequences for a recurrent autosomal-recessive deletion mutation in revealing the genetic basis of SPG23.

Indexed as

Sequence DeletionAmino Acid SequenceAnimalsApoptosisAsian PeopleChromosomes, Human, Pair 1ExonsFaciesFemaleFibroblastsGenetic LinkageGenetic LociGenome-Wide Association StudyHomozygoteHumansKeratinocytesDSTYK protein, humanReceptor-Interacting Protein Serine-Threonine Kinasesautosomal-recessivedeletionDSTYKgenehereditary spastic paraplegiamutationpigmentationSpastic Paraplegia 23vitiligowhole-exome sequencing

Identifiers

PMID28157540
PMCPMC5294675
OpenAlexW2583584752

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.