Evidence map›Paper›PMID 28154159›Full record

ArticleJournal of cell science2017

The T cell IFT20 interactome reveals new players in immune synapse assembly.

Donatella Galgano, Anna Onnis, Elisa Pappalardo, Federico Galvagni, Oreste Acuto, Cosima T Baldari

Open access · bronzeAbstract read
In one paragraph

Article in Journal of cell science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Article
  3. International journal of molecular sciences · 2024
    Article
  4. Frontiers in cell and developmental biology · 2023
    Article
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Dissecting the Vesicular Trafficking Function of IFT Subunits.Frontiers in cell and developmental biology · 2019
    Review
  17. Review
  18. Article
  19. Cilia protein IFT88 regulates extracellular protease activity by optimizing LRP-1-mediated endocytosis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Donatella GalganoDepartment of Life Sciences, University of Siena, Siena 53100, Italy.
Anna OnnisDepartment of Life Sciences, University of Siena, Siena 53100, Italy.
Elisa PappalardoSir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, UK.ORCID 0000-0001-6881-9176
Federico GalvagniDepartment of Biotechnology, Chemistry and Pharmacy, University of Siena, Siena 53100, Italy.
Oreste AcutoSir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, UK.
Cosima T BaldariDepartment of Life Sciences, University of Siena, Siena 53100, Italy cosima.baldari@unisi.it.ORCID 0000-0002-4414-6744
University of Siena · ITUniversity of Oxford · GB

Funding

Wellcome Trust 200844/Z/16/Z
6 · The paper itself

Abstract

Sustained signalling at the immune synapse (IS) requires the synaptic delivery of recycling endosome-associated T cell antigen receptors (TCRs). IFT20, a component of the intraflagellar transport system, controls TCR recycling to the IS as a complex with IFT57 and IFT88. Here, we used quantitative mass spectrometry to identify additional interaction partners of IFT20 in Jurkat T cells. In addition to IFT57 and IFT88, the analysis revealed new binding partners, including IFT54 (also known as TRAF3IP1), GMAP-210 (also known as TRIP11), Arp2/3 complex subunit-3 (ARPC3), COP9 signalosome subunit-1 (CSN1, also known as GPS1) and ERGIC-53 (also known as LMAN1). A direct interaction between IFT20 and both IFT54 and GMAP-210 was confirmed in pulldown assays. Confocal imaging of antigen-specific conjugates using T cells depleted of these proteins by RNA interference showed that TCR accumulation and phosphotyrosine signalling at the IS were impaired in the absence of IFT54, ARPC3 or ERGIC-53. Similar to in IFT20-deficient T cells, this defect resulted from a reduced ability of endosomal TCRs to polarize to the IS despite a correct translocation of the centrosome towards the antigen-presenting cell contact. Our data underscore the traffic-related role of an IFT20 complex that includes components of the intracellular trafficking machinery in IS assembly.

Indexed as

Protein Interaction MapsActin-Related Protein 2-3 ComplexCarrier ProteinsCytoskeletal ProteinsEndocytosisHEK293 CellsHumansImmunological SynapsesJurkat CellsLymphocyte ActivationMannose-Binding LectinsMass SpectrometryMembrane ProteinsMicrotubule-Associated ProteinsMicrotubule-Organizing CenterNuclear ProteinsActin-Related Protein 2-3 ComplexARPC3 protein, humanCarrier ProteinsCytoskeletal ProteinsIFT20 protein, humanLMAN1 protein, humanMannose-Binding LectinsMembrane ProteinsMicrotubule-Associated ProteinsNuclear ProteinsReceptors, Antigen, T-CellReceptors, TransferrinTRAF3IP1 protein, humanTRIP11 protein, humanImmune synapse assemblyIntraflagellar transport systemMass spectrometry analysis

Identifiers

PMID28154159
PMCPMC5358343
OpenAlexW2583701193

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.