Evidence map›Paper›PMID 28153719›Full record

ArticleBiochemical and biophysical research communications2017

C21orf57 is a human homologue of bacterial YbeY proteins.

Anubrata Ghosal, Caroline Köhrer, Vignesh M P Babu, Kinrin Yamanaka, Bryan W Davies, Asha I Jacob, Daniel J Ferullo, Charley C Gruber, Maarten Vercruysse, Graham C Walker

Open access · bronzeAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. How RNases Shape Mitochondrial Transcriptomes.International journal of molecular sciences · 2022
    Review
  3. Article
  4. Article
  5. Article
  6. Human Mitoribosome Biogenesis and Its Emerging Links to Disease.International journal of molecular sciences · 2021
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Anubrata GhosalDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Caroline KöhrerDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Vignesh M P BabuDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Kinrin YamanakaDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Bryan W DaviesDepartment of Molecular Biosciences, University of Texas at Austin, Austin, TX, USA.
Asha I JacobDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Daniel J FerulloDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Charley C GruberDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Maarten VercruysseDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Graham C WalkerDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA. Electronic address: gwalker@mit.edu.
Massachusetts Institute of Technology · USThe University of Texas at Austin · US

Funding

MOLEULAR GENETICS OF RHIZOBIUM PLASMIDSR01GM031030 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI WALKER, GRAHAM C · 1985 to 2020
$8.6M
STRUCTURE/FUNCTION OF TRANSFER RIBONUCLEIC ACIDSR37GM017151 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI RAJBHANDARY, UTTAM L · 1997 to 2006
$3.6M
STRUCTURE &FUNCTION OF TRANSFER RIBONUCLEIC ACIDSR01GM017151 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI RAJBHANDARY, UTTAM L · 1985 to 2015
$2.4M
Structure and Function of Transfer Ribonucleic AcidsR56GM017151 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI RAJBHANDARY, UTTAM L · 2009 to 2009
$559k
CHARACTERIZING THE CELL CYCLE REGULATION OF MCM3F32GM017151 · NIGMS · CORNELL UNIVERSITY ITHACA · PI YOUNG, MICHAEL R · 1994 to 1995
–
NIGMS NIH HHS F32 GM017151NIGMS NIH HHS R01 GM017151NIGMS NIH HHS R01 GM031030NIGMS NIH HHS R37 GM017151NIGMS NIH HHS R56 GM017151
6 · The paper itself

Abstract

The product of the human C21orf57 (huYBEY) gene is predicted to be a homologue of the highly conserved YbeY proteins found in nearly all bacteria. We show that, like its bacterial and chloroplast counterparts, the HuYbeY protein is an RNase and that it retains sufficient function in common with bacterial YbeY proteins to partially suppress numerous aspects of the complex phenotype of an Escherichia coli ΔybeY mutant. Expression of HuYbeY in Saccharomyces cerevisiae, which lacks a YbeY homologue, results in a severe growth phenotype. This observation suggests that the function of HuYbeY in human cells is likely regulated through specific interactions with partner proteins similarly to the way YbeY is regulated in bacteria.

Indexed as

Evolution, MolecularSequence Homology, Amino AcidAmino Acid SequenceBase SequenceChloroplastsConserved SequenceEscherichia coli ProteinsMetalloproteinsMolecular Sequence DataRibonucleasesEscherichia coli ProteinsMetalloproteinsRibonucleasesYbeY protein, E coliYBEY protein, humanC21orf57RNaseYBEYYeast

Identifiers

PMID28153719
PMCPMC5318257
OpenAlexW2585457089

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.