ArticlePloS one2017
Draft genome sequence of Karnal bunt pathogen (Tilletia indica) of wheat provides insights into the pathogenic mechanisms of quarantined fungus.
Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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Who cites it
17 citing papers in PubMed.
- Genome and transcriptome based comparative analysis of Tilletia indica to decipher the causal genes for pathogenicity of Karnal bunt in wheat.BMC plant biology · 2024Article
- Integrated Genome Sequencing and Transcriptome Analysis Identifies Candidate Pathogenicity Genes fromJournal of fungi (Basel, Switzerland) · 2024Article
- Comparative analysis of nineFrontiers in microbiology · 2023Article
- Understanding the Rice Fungal Pathogen Tilletia horrida from Multiple Perspectives.Rice (New York, N.Y.) · 2022Review
- Transcriptome Analysis of Wheat-Plants (Basel, Switzerland) · 2022Article
- Interplay between the microalgaeFrontiers in microbiology · 2022Article
- Review
- Development of a loop-mediated isothermal amplification assay for the detection of Tilletia controversa based on genome comparison.Scientific reports · 2021Article
- A highly contiguous reference genome assembly for3 Biotech · 2021Article
- Comparative genomic analysis of monosporidial and monoteliosporic cultures for unraveling the complexity of molecular pathogenesis of Tilletia indica pathogen of wheat.Scientific reports · 2019Article
- De novo genome sequencing and secretome analysis of3 Biotech · 2019Article
- Complementary Proteomics, Genomics approaches identifies potential pathogenicity/virulence factors in Tilletia indica induced under the influence of host factor.Scientific reports · 2019Article
- Genome sequencing and comparison of fiveIMA fungus · 2019Article
- Augmentation of crop productivity through interventions of omics technologies in India: challenges and opportunities.3 Biotech · 2018Review
- Integrated proteomics, genomics, metabolomics approaches reveal oxalic acid as pathogenicity factor in Tilletia indica inciting Karnal bunt disease of wheat.Scientific reports · 2018Article
- Improved Draft Genome Sequence of a Monoteliosporic Culture of the Karnal Bunt (Tilletia indica) Pathogen of Wheat.Genome announcements · 2018Article
- Soil fungal biodiversity and pathogen identification of rotten disease in Aconitum carmichaelii (Fuzi) roots.PloS one · 2018Article
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6 authors.
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Abstract
Karnal bunt disease in wheat is caused by hemibiotrophic fungus, Tilletia indica that has been placed as quarantine pest in more than 70 countries. Despite its economic importance, little knowledge about the molecular components of fungal pathogenesis is known. In this study, first time the genome sequence of T. indica has been deciphered for unraveling the effectors' functions of molecular pathogenesis of Karnal bunt disease. The T. indica genome was sequenced employing hybrid approach of PacBio Single Molecule Real Time (SMRT) and Illumina HiSEQ 2000 sequencing platforms. The genome was assembled into 10,957 contigs (N50 contig length 3 kb) with total size of 26.7 Mb and GC content of 53.99%. The number of predicted putative genes were 11,535, which were annotated with Gene Ontology databases. Functional annotation of Karnal bunt pathogen genome and classification of identified effectors into protein families revealed interesting functions related to pathogenesis. Search for effectors' genes using pathogen host interaction database identified 135 genes. The T. indica genome sequence and putative genes involved in molecular pathogenesis would further help in devising novel and effective disease management strategies including development of resistant wheat genotypes, novel biomarkers for pathogen detection and new targets for fungicide development.
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