Evidence map›Paper›PMID 28151065›Full record

ArticleViral immunology2017

Relative mRNA Expression Levels of Restriction Factors and Antiviral Genes in Fetal and Adult Human Monocytes and Monocyte-Derived Macrophages.

Karen Trang, Rui André Raposo, Margaret M Lowe, Elisabeth R Krow-Lucal, Wes Yonemoto, Vinicius D Cabido, Devi SenGupta, Joseph M McCune

Open access · greenAbstract readComparative Study
In one paragraph

Article in Viral immunology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Differentiation-dependent antiviral capacities of amphibian (The Journal of biological chemistry · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Karen Trang1 Division of Experimental Medicine, Department of Medicine, University of California San Francisco (UCSF), San Francisco, California.
Rui André Raposo2 Department of Microbiology, Immunology and Tropical Medicine, The George Washington University , Washington, District of Columbia.
Margaret M Lowe1 Division of Experimental Medicine, Department of Medicine, University of California San Francisco (UCSF), San Francisco, California.
Elisabeth R Krow-Lucal1 Division of Experimental Medicine, Department of Medicine, University of California San Francisco (UCSF), San Francisco, California.
Wes Yonemoto1 Division of Experimental Medicine, Department of Medicine, University of California San Francisco (UCSF), San Francisco, California.
Vinicius D Cabido2 Department of Microbiology, Immunology and Tropical Medicine, The George Washington University , Washington, District of Columbia.
Devi SenGupta1 Division of Experimental Medicine, Department of Medicine, University of California San Francisco (UCSF), San Francisco, California.
Joseph M McCune1 Division of Experimental Medicine, Department of Medicine, University of California San Francisco (UCSF), San Francisco, California.
University of California, San Francisco · USGeorge Washington University · US

Funding

Virology CoreP30AI027763 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STEVEN Grant DEEKS · 1988 to 2026
$93.6M
MOLECULAR AND CELLULAR IMMUNOLOGYT32AI007334 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CYSTER, JASON G · 1988 to 2023
$11.0M
NIAID NIH HHS P30 AI027763NIAID NIH HHS T32 AI007334
6 · The paper itself

Abstract

Among untreated HIV-infected pregnant women, the frequency of mother-to-child transmission of HIV is low (5-10%), with most infections occurring at or after birth. Given findings that fetal and adult monocytes are distinct from one another in terms of basal transcriptional profiles, and in phosphorylation of signal transducer and activators of transcription in response to cytokines, we hypothesized that fetal CD14+CD16- monocyte and monocyte-derived macrophages (MDMs) might, compared to their adult counterparts, express higher levels of transcripts for restriction factors and antiviral factors at baseline and/or after stimulation with cytokines that might be induced upon transmission of HIV in utero, for example, IFNα, IFNγ, and IL-6. We carried out these experiments and noted that a few genes, including APOBEC3B, APOBEC3C, and IFITM2, were expressed to a greater degree in fetal monocytes compared to adults. Similarly, the expression levels of APOBEC3F and TRIM32 were greater in fetal MDMs. However, most of these differences were not observed after stimulation with cytokines and the vast majority of antiviral genes were more highly expressed in adults. Therefore, the results of this study are not consistent with the hypothesis that increased expression of antiviral genes in fetal myeloid cells confers immune protection to fetuses in utero.

Indexed as

Gene Expression ProfilingAdultCells, CulturedFemaleFetusHIVHIV InfectionsHumansImmunologic FactorsMacrophagesMonocytesPregnancyPregnancy Complications, InfectiousRNA, MessengerImmunologic FactorsRNA, Messengerinterferonmacrophagemonocyterestriction factor

Identifiers

PMID28151065
PMCPMC5393417
OpenAlexW2583623440

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.