Evidence map›Paper›PMID 28149334›Full record

ArticleClinical epigenetics2017

Epigenome-wide association study of DNA methylation in panic disorder.

Mihoko Shimada-Sugimoto, Takeshi Otowa, Taku Miyagawa, Tadashi Umekage, Yoshiya Kawamura, Miki Bundo, Kazuya Iwamoto, Mamoru Tochigi, Kiyoto Kasai, Hisanobu Kaiya and 4 more

Open access · goldAbstract read
In one paragraph

Article in Clinical epigenetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 60 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Review
  7. Candidate biomarkers in psychiatric disorders: state of the field.World psychiatry : official journal of the World Psychiatric Association (WPA) · 2023
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Genetic and epigenetic analyses of panic disorder in the post-GWAS era.Journal of neural transmission (Vienna, Austria : 1996) · 2020
    Review
  18. Review
  19. Article
  20. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 1 country.

Mihoko Shimada-SugimotoDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo Ward, Tokyo, 113-0033 Japan.
Takeshi OtowaGraduate School of Clinical Psychology, Teikyo Heisei University Major of Professional Clinical Psychology, 2-51-4 Higashiikebukuro, Toshima Ward, Tokyo, 171-0014 Japan.
Taku MiyagawaDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo Ward, Tokyo, 113-0033 Japan.
Tadashi UmekageDivision for Environment, Health and Safety, The University of Tokyo, 7-3-1 Hongo, Bunkyo Ward, Tokyo, 113-0033 Japan.
Yoshiya KawamuraDepartment of Psychiatry, Shonan Kamakura General Hospital, 1370-1 Okamoto, Kamakura City, Kanagawa 247-8533 Japan.
Miki BundoDepartment of Molecular Brain Science, Graduate School of Medical Sciences, Kumamoto University, 1-1-1 Honjo, Chuo Ward, Kumamoto City, Kumamoto 860-8556 Japan.
Kazuya IwamotoDepartment of Molecular Brain Science, Graduate School of Medical Sciences, Kumamoto University, 1-1-1 Honjo, Chuo Ward, Kumamoto City, Kumamoto 860-8556 Japan.
Mamoru TochigiDepartment of Neuropsychiatry, Teikyo University School of Medicine, 2-11-1 Kaga, Itabashi Ward, Tokyo, 173-0003 Japan.
Kiyoto KasaiDepartment of Neuropsychiatry, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo Ward, Tokyo, 113-0033 Japan.
Hisanobu KaiyaPanic Disorder Research Center, Warakukai Med Corp, 3-9-18 Akasaka, Minato Ward, Tokyo, 107-0052 Japan.
Hisashi TaniiDepartment of Psychiatry, Institute of Medical Life Science, Graduate School of Medicine, Mie University, 2-174 Edobashi, Tsu City, Mie 514-8502 Japan.
Yuji OkazakiDepartment of Psychiatry, Koseikai Michinoo Hospital, 1-1 Nijigaokamachi, Nagasaki City, Nagasaki 852-8055 Japan.
Katsushi TokunagaDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo Ward, Tokyo, 113-0033 Japan.
Tsukasa SasakiDepartment of Physical and Health Education, Graduate School of Education, The University of Tokyo, 7-3-1 Hongo, Bunkyo Ward, Tokyo, 113-0033 Japan.
The University of Tokyo · JPKumamoto University · JPMie University · JPShonan Kamakura General Hospital · JPTeikyo Heisei University · JPTeikyo University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPanic disorder (PD) is considered to be a multifactorial disorder emerging from interactions among multiple genetic and environmental factors. To date, although genetic studies reported several susceptibility genes with PD, few of them were replicated and the pathogenesis of PD remains to be clarified. Epigenetics is considered to play an important role in etiology of complex traits and diseases, and DNA methylation is one of the major forms of epigenetic modifications. In this study, we performed an epigenome-wide association study of PD using DNA methylation arrays so as to investigate the possibility that different levels of DNA methylation might be associated with PD.

methodsThe DNA methylation levels of CpG sites across the genome were examined with genomic DNA samples (PD,

resultsForty CpG sites showed significant association with PD at 5% FDR correction, though the differences of the DNA methylation levels were relatively small. Most of the significant CpG sites (37/40 CpG sites) were located in or around CpG islands. Many of the significant CpG sites (27/40 CpG sites) were located upstream of genes, and all such CpG sites with the exception of two were hypomethylated in PD subjects. A pathway analysis on the genes annotated to the significant CpG sites identified several pathways, including "positive regulation of lymphocyte activation."

conclusionsAlthough future studies with larger number of samples are necessary to confirm the small DNA methylation abnormalities associated with PD, there is a possibility that several CpG sites might be associated, together as a group, with PD.

Indexed as

DNA MethylationCase-Control StudiesCpG IslandsEpigenesis, GeneticEpigenomicsFemaleGene Regulatory NetworksGenetic Predisposition to DiseaseGenome, HumanGenome-Wide Association StudyHumansLymphocyte SubsetsMalePanic DisorderDNA methylationEpigeneticsEpigenome-wide association studyPanic disorderPsychiatric disorder

Identifiers

PMID28149334
PMCPMC5270210
OpenAlexW2573769293

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.