Evidence map›Paper›PMID 28144700›Full record

ArticleMicrobial ecology2017

Sediment Microbial Diversity of Three Deep-Sea Hydrothermal Vents Southwest of the Azores.

Teresa Cerqueira, Diogo Pinho, Hugo Froufe, Ricardo S Santos, Raul Bettencourt, Conceição Egas

Abstract read
PubMed Publisher
In one paragraph

Article in Microbial ecology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. The Distribution ofFrontiers in microbiology · 2020
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Teresa CerqueiraDepartment of Oceanography and Fisheries, University of the Azores, Rua Prof. Dr. Frederico Machado, 4, 9901-862, Horta, Portugal. mt.cerqueira@mare-centre.pt.ORCID 0000-0002-3397-574X
Diogo PinhoNext Generation Sequencing Unit, UCBiotech-CNC, Parque Tecnológico de Cantanhede, Núcleo 04, Lote 8, 3060-197, Cantanhede, Portugal.
Hugo FroufeNext Generation Sequencing Unit, UCBiotech-CNC, Parque Tecnológico de Cantanhede, Núcleo 04, Lote 8, 3060-197, Cantanhede, Portugal.
Ricardo S SantosDepartment of Oceanography and Fisheries, University of the Azores, Rua Prof. Dr. Frederico Machado, 4, 9901-862, Horta, Portugal.
Raul BettencourtMARE-Marine and Environmental Sciences Centre-Azores, Rua Prof. Dr. Frederico Machado, 4, 9901-862, Horta, Portugal.
Conceição EgasNext Generation Sequencing Unit, UCBiotech-CNC, Parque Tecnológico de Cantanhede, Núcleo 04, Lote 8, 3060-197, Cantanhede, Portugal.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Menez Gwen, Lucky Strike and Rainbow are the three most visited and well-known deep-sea hydrothermal vent fields in the Azores region, located in the Mid-Atlantic Ridge. Their distinct geological and ecological features allow them to support a diversity of vent communities, which are largely dependent on Bacteria and Archaea capable of anaerobic or microaerophilic metabolism. These communities play important ecological roles through chemoautotrophy, feeding and in establishing symbiotic associations. However, the occurrence and distribution of these microbes remain poorly understood, especially in deep-sea sediments. In this study, we provide for the first time a comparative survey of the sediment-associated microbial communities from these three neighbouring vent fields. Sediment samples collected in the Menez Gwen, Lucky Strike and Rainbow vent fields showed significant differences in trace-metal concentrations and associated microbiomes. The taxonomic profiles of bacterial, archaeal and eukaryotic representatives were assessed by rRNA gene-tag pyrosequencing, identified anaerobic methanogens and microaerobic Epsilonproteobacteria, particularly at the Menez Gwen site, suggesting sediment communities potentially enriched in sub-seafloor microbes rather than from pelagic microbial taxa. Cosmopolitan OTUs were also detected mostly at Lucky Strike and Rainbow sites and affiliated with the bacterial clades JTB255, Sh765B-TzT-29, Rhodospirillaceae and OCS155 marine group and with the archaeal Marine Group I. Some variations in the community composition along the sediment depth were revealed. Elemental contents and hydrothermal influence are suggested as being reflected in the composition of the microbial assemblages in the sediments of the three vent fields. Altogether, these findings represent valuable information for the understanding of the microbial distribution and potential ecological roles in deep-sea hydrothermal fields.

Indexed as

ArchaeaAtlantic OceanAzoresBacteriaEukaryotaGeologic SedimentsHydrothermal VentsPhylogenyRNA, Ribosomal, 16SRNA, Ribosomal, 16SDeep-sea sedimentsHydrothermal vent fieldLucky StrikeMenez GwenMicrobial diversityPyrosequencingRainbow

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.