Evidence map›Paper›PMID 28141854›Full record

ArticlePloS one2017

Soybean cyst nematode culture collections and field populations from North Carolina and Missouri reveal high incidences of infection by viruses.

Casey L Ruark, Stephen R Koenning, Eric L Davis, Charles H Opperman, Steven A Lommel, Melissa G Mitchum, Tim L Sit

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
5.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

  1. Ancient and current association of theJournal of virology · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Casey L RuarkDepartment of Entomology and Plant Pathology, North Carolina State University, 2510 Thomas Hall, Raleigh, North Carolina, United States of America.
Stephen R KoenningDepartment of Entomology and Plant Pathology, North Carolina State University, 2510 Thomas Hall, Raleigh, North Carolina, United States of America.
Eric L DavisDepartment of Entomology and Plant Pathology, North Carolina State University, 2510 Thomas Hall, Raleigh, North Carolina, United States of America.
Charles H OppermanDepartment of Entomology and Plant Pathology, North Carolina State University, 2510 Thomas Hall, Raleigh, North Carolina, United States of America.
Steven A LommelDepartment of Entomology and Plant Pathology, North Carolina State University, 2510 Thomas Hall, Raleigh, North Carolina, United States of America.
Melissa G MitchumDivision of Plant Sciences and Bond Life Sciences Center, University of Missouri, 371H Bond Life Sciences Center, Columbia, Missouri, United States of America.
Tim L SitDepartment of Entomology and Plant Pathology, North Carolina State University, 2510 Thomas Hall, Raleigh, North Carolina, United States of America.
North Carolina State University · USUniversity of Missouri · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Five viruses were previously discovered infecting soybean cyst nematodes (SCN; Heterodera glycines) from greenhouse cultures maintained in Illinois. In this study, the five viruses [ScNV, ScPV, ScRV, ScTV, and SbCNV-5] were detected within SCN greenhouse and field populations from North Carolina (NC) and Missouri (MO). The prevalence and titers of viruses in SCN from 43 greenhouse cultures and 25 field populations were analyzed using qRT-PCR. Viral titers within SCN greenhouse cultures were similar throughout juvenile development, and the presence of viral anti-genomic RNAs within egg, second-stage juvenile (J2), and pooled J3 and J4 stages suggests active viral replication within the nematode. Viruses were found at similar or lower levels within field populations of SCN compared with greenhouse cultures of North Carolina populations. Five greenhouse cultures harbored all five known viruses whereas in most populations a mixture of fewer viruses was detected. In contrast, three greenhouse cultures of similar descent to one another did not possess any detectable viruses and primarily differed in location of the cultures (NC versus MO). Several of these SCN viruses were also detected in Heterodera trifolii (clover cyst) and Heterodera schachtii (beet cyst), but not the other cyst, root-knot, or reniform nematode species tested. Viruses were not detected within soybean host plant tissue. If nematode infection with viruses is truly more common than first considered, the potential influence on nematode biology, pathogenicity, ecology, and control warrants continued investigation.

Indexed as

AnimalsDNA-Directed RNA PolymerasesGene Expression Regulation, PlantGlycine maxIncidenceLife Cycle StagesMissouriNorth CarolinaPlant DiseasesPlant VirusesReal-Time Polymerase Chain ReactionSpecies SpecificityTylenchoideaVirus ReplicationDNA-Directed RNA Polymerases

Identifiers

PMID28141854
PMCPMC5283738
OpenAlexW2583274322

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.