Evidence map›Paper›PMID 28140394›Full record

ArticleThe ISME journal2017

Sticking together: inter-species aggregation of bacteria isolated from iron snow is controlled by chemical signaling.

Jiro F Mori, Nico Ueberschaar, Shipeng Lu, Rebecca E Cooper, Georg Pohnert, Kirsten Küsel

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jiro F MoriInstitute of Ecology, Friedrich Schiller University Jena, Jena, Germany.ORCID 0000-0002-3311-1511
Nico UeberschaarInstitute of Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Jena, Germany.
Shipeng LuInstitute of Ecology, Friedrich Schiller University Jena, Jena, Germany.
Rebecca E CooperInstitute of Ecology, Friedrich Schiller University Jena, Jena, Germany.
Georg PohnertInstitute of Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Jena, Germany.
Kirsten KüselInstitute of Ecology, Friedrich Schiller University Jena, Jena, Germany.
Friedrich Schiller University Jena · DEGerman Centre for Integrative Biodiversity Research · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Marine and lake snow is a continuous shower of mixed organic and inorganic aggregates falling from the upper water where primary production is substantial. These pelagic aggregates provide a niche for microbes that can exploit these physical structures and resources for growth, thus are local hot spots for microbial activity. However, processes underlying their formation remain unknown. Here, we investigated the role of chemical signaling between two co-occurring bacteria that each make up more than 10% of the community in iron-rich lakes aggregates (iron snow). The filamentous iron-oxidizing Acidithrix strain showed increased rates of Fe(II) oxidation when incubated with cell-free supernatant of the heterotrophic iron-reducing Acidiphilium strain. Amendment of Acidithrix supernatant to motile cells of Acidiphilium triggered formation of cell aggregates displaying similar morphology to those of iron snow. Comparative metabolomics enabled the identification of the aggregation-inducing signal, 2-phenethylamine, which also induced faster growth of Acidiphilium. We propose a model that shows rapid iron snow formation, and ultimately energy transfer from the photic zone to deeper water layers, is controlled via a chemically mediated interplay.

Indexed as

Microbial InteractionsAcidiphiliumActinobacteriaBacteriaFerrous CompoundsIronLakesOxidation-ReductionPhenethylaminesSignal TransductionFerrous CompoundsIronphenethylaminePhenethylamines

Identifiers

PMID28140394
PMCPMC5437920
OpenAlexW2585471183

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.