Evidence map›Paper›PMID 28139755›Full record

ArticleThe pharmacogenomics journal2018

Genetically determined high activity of IL-12 and IL-18 in ulcerative colitis and TLR5 in Crohns disease were associated with non-response to anti-TNF therapy.

S Bank, P S Andersen, J Burisch, N Pedersen, S Roug, J Galsgaard, S Y Turino, J B Brodersen, S Rashid, B K Rasmussen and 7 more

Abstract read
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In one paragraph

Article in The pharmacogenomics journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 2 pooled it
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 2 syntheses or guidelines pooled it, 65 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  16. Serum TGF-Journal of immunology research · 2023
    Article
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 12 institutions in 1 country.

S BankMedical Department, Viborg Regional Hospital, Viborg, Denmark.
P S AndersenMicrobiology and Infection Control, Statens Serum Institut, Copenhagen, Denmark.ORCID 0000-0001-5656-0427
J BurischDepartment of Gastroenterology, Herlev Hospital, Herlev, Denmark.
N PedersenDepartment of Gastroenterology, Herlev Hospital, Herlev, Denmark.
S RougDepartment of Gastroenterology, Hvidovre Hospital, Hvidovre, Denmark.
J GalsgaardMedical Department, Køge Hospital, Køge, Denmark.
S Y TurinoDepartment of Surgery, Hillerød Hospital, Hillerød, Denmark.
J B BrodersenMedical Department, Sydvestjysk Hospital, Esbjerg, Denmark.
S RashidMedical Department, Bispebjerg Hospital, Bispebjerg, Denmark.
B K RasmussenMedical Department, Nykøbing Falster Hospital, Nykøbing Falster, Denmark.
S AvlundDepartment of Hepato-Gastroenterology, Aarhus University Hospital, Aarhus, Denmark.
T B OlesenMedical Department, Slagelse Hospital, Slagelse, Denmark.
H J HoffmannDepartment of Respiratory Diseases B, Institute for Clinical Medicine, Aarhus University Hospital, Aarhus, Denmark.
B A NexøBiomedicine, University of Aarhus, Aarhus, Denmark.
J SodeInstitute of Regional Health Research, University of Southern Denmark, Odense, Denmark.ORCID 0000-0002-2718-9320
U VogelNational Research Centre for the Working Environment, Copenhagen, Denmark.
V AndersenMedical Department, Viborg Regional Hospital, Viborg, Denmark.
Aarhus University · DKAarhus University Hospital · DKHerlev Hospital · DKStatens Serum Institut · DKBispebjerg Hospital · DKHvidovre Hospital · DKNational Research Centre for the Working Environment · DKOdense University Hospital · DKSjællands Universitetshospital, Nykøbing F. · DKSlagelse Hospital · DKUniversity of Southern Denmark · DKZealand University Hospital Køge · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anti-tumour necrosis factor-α (TNF-α) is used for treatment of severe cases of inflammatory bowel diseases (IBD), including Crohn's disease (CD) and ulcerative colitis (UC). However, one-third of the patients do not respond to the treatment. A recent study indicated that genetically determined high activity of pro-inflammatory cytokines, including interleukin-1β (IL-1β), IL-6 and interferon gamma (IFN-γ), are associated with non-response to anti-TNF therapy. Using a candidate gene approach, 21 functional single-nucleotide polymorphisms (SNPs) in 14 genes in the Toll-like receptors, the inflammasome and the IFNG pathways were assessed in 482 and 256 prior anti-TNF naïve Danish patients with CD and UC, respectively. The results were analysed using logistic regression (adjusted for age and gender). Eight functional SNPs were associated with anti-TNF response either among patients with CD (TLR5 (rs5744174) and IFNGR2 (rs8126756)), UC (IL12B (rs3212217), IL18 (rs1946518), IFNGR1 (rs2234711), TBX21 (rs17250932) and JAK2 (rs12343867)) or in the combined cohort of patient with CD and UC (IBD) (NLRP3 (rs10754558), IL12B (rs3212217) and IFNGR1 (rs2234711)) (P<0.05). Only the association with heterozygous genotype of IL12B (rs3212217) (OR: 0.24, 95% CI: 0.11-0.53, P=0.008) among patients with UC withstood Bonferroni correction for multiple testing. In conclusion, Our results suggest that SNPs associated with genetically determined high activity of TLR5 among patients with CD and genetically determined high IL-12 and IL-18 levels among patients with UC were associated with non-response. Further studies will evaluate whether these genes may help stratifying patients according to the expected response to anti-TNF treatment.

Indexed as

AdolescentAdultAgedAged, 80 and overChildCohort StudiesColitis, UlcerativeCrohn DiseaseFemaleHumansInflammatory Bowel DiseasesInterferon-gammaInterleukin-12Interleukin-18MaleMiddle AgedIL18 protein, humanInterferon-gammaInterleukin-12Interleukin-18TLR5 protein, humanTNF protein, humanToll-Like Receptor 5Tumor Necrosis Factor-alpha

Identifiers

PMID28139755
OpenAlexW2585115476

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.