Evidence map›Paper›PMID 28139540›Full record

ArticleThe Indian journal of medical research2016

Transcriptome profiling of visceral adipose tissue in a novel obese rat model, WNIN/Ob & its comparison with other animal models.

Siva Sankara Vara Prasad Sakamuri, Uday Kumar Putcha, Giridharan Nappan Veettil, Vajreswari Ayyalasomayajula

Open access · diamondAbstract read
In one paragraph

Article in The Indian journal of medical research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Methylation profiles at birth linked to early childhood obesity.Journal of developmental origins of health and disease · 2024
    Article
  2. Methylation profiles at birth linked to early childhood obesity.medRxiv : the preprint server for health sciences · 2024
    Article
  3. Article
4 · The record

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5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Siva Sankara Vara Prasad SakamuriDepartment of Biochemistry, National Institute of Nutrition (ICMR), Hyderabad, India.
Uday Kumar PutchaDepartment of Pathology, National Institute of Nutrition (ICMR), Hyderabad, India.
Giridharan Nappan VeettilMolecular Genetics Laboratory, National Center for Laboratory Animal Sciences (ICMR), Hyderabad, India.
Vajreswari AyyalasomayajulaDepartment of Biochemistry, National Institute of Nutrition (ICMR), Hyderabad, India.
National Institute of Nutrition · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND &

objectivesAdipose tissue dysfunction in obesity is linked to the development of type 2 diabetes and cardiovascular diseases. We studied the differential gene expression in retroperitoneal adipose tissue of a novel obese rat model, WNIN/Ob, to understand the possible underlying transcriptional changes involved in the development of obesity and associatedcomorbidities in this model.

methodsFour month old, male WNIN/Ob lean and obese rats were taken, blood was collected and tissues were dissected. Body composition analysis and adipose tissue histology were performed. Global gene expression in retroperitoneal adipose tissue of lean and obese rats was studied by microarray using Affymetrix GeneChips.

resultsOne thousand and seventeen probe sets were downregulated and 963 probe sets were upregulated (more than two-fold) in adipose tissue of WNIN/Ob obese rats when compared to that of lean rats. Small nucleolar RNA (SnoRNA) made most of the underexpressed probe sets, whereas immune system-related genes werethe most overexpressed in the adipose tissues of obese rats. Genes coding for cytoskeletal proteinswere downregulated, whereas genes related to lipid biosynthesis were elevated in the adipose tissue of obese rats. INTERPRETATION &

conclusionsMajority of the altered genes and pathways in adipose tissue of WNIN/Ob obese rats were similar to the observations in other obese animal models and human obesity. Based on these observations, it is proposed that WNIN/Ob obese rat model may be a good model to study the mechanisms involved in the development of obesity and its comorbidities. Downregulation of SnoRNA appears to be a novel feature in this obese rat model.

Indexed as

AnimalsDisease Models, AnimalGene Expression RegulationHumansImmunity, InnateIntra-Abdominal FatLiverMaleMetabolic Networks and PathwaysObesityRatsRNA, Small NucleolarTissue Array AnalysisTranscriptomeRNA, Small Nucleolar

Identifiers

PMID28139540
PMCPMC5320847
OpenAlexW2578746126

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LicenceCC BY-NC-SA
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.