Evidence map›Paper›PMID 28138397›Full record

ArticleThe journal of pathology. Clinical research2017

A combined biomarker and clinical panel for chronic graft versus host disease diagnosis.

Joseph Pidala, Tara K Sigdel, Anyou Wang, Sue Hsieh, Yoshi Inamoto, Paul J Martin, Mary Ed Flowers, John A Hansen, Stephanie J Lee, Minnie M Sarwal

Abstract read
In one paragraph

Article in The journal of pathology. Clinical research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Trial
  2. Article
  3. Article
  4. Review
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  6. Article
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  8. Review
  9. Article
  10. Biomarkers for Allogeneic HCT Outcomes.Frontiers in immunology · 2020
    Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Review
  16. Cutaneous Graft-Versus-Host Disease: Diagnosis and Treatment.American journal of clinical dermatology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Joseph PidalaDepartment of Blood and Marrow Transplantation H. Lee Moffitt Cancer Center and Research Institute Tampa FL USA.
Tara K SigdelDepartment of Surgery University of California San Francisco San Francisco CA USA.
Anyou WangDepartment of Surgery University of California San Francisco San Francisco CA USA.
Sue HsiehDepartment of Surgery University of California San Francisco San Francisco CA USA.
Yoshi InamotoClinical Research Division Fred Hutchinson Cancer Research Center Seattle WA USA.
Paul J MartinClinical Research Division Fred Hutchinson Cancer Research Center Seattle WA USA.
Mary Ed FlowersClinical Research Division Fred Hutchinson Cancer Research Center Seattle WA USA.
John A HansenClinical Research Division Fred Hutchinson Cancer Research Center Seattle WA USA.
Stephanie J LeeClinical Research Division Fred Hutchinson Cancer Research Center Seattle WA USA.
Minnie M SarwalDepartment of Surgery University of California San Francisco San Francisco CA USA.

Funding

Improving Outcomes Assessment in Chronic GVHDR01CA118953 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI LEE, STEPHANIE J · 2011 to 2025
$8.3M
Training and Career Development CoreU54CA163438 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI LEE, STEPHANIE J · 2011 to 2014
$3.7M
Improving Outcomes Assessment in Chronic GVHDU01CA118953 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI LEE, STEPHANIE J · 2007 to 2010
$3.1M
Biomarker Discovery in Chronic Graft-vs-Host DiseaseR01HL094260 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HANSEN, JOHN ANDREW · 2008 to 2011
$1.8M
NCI NIH HHS R01 CA118953NCI NIH HHS U01 CA118953NCI NIH HHS U54 CA163438NHLBI NIH HHS R01 HL094260
6 · The paper itself

Abstract

Whilst many chronic graft versus host disease (cGVHD) biomarkers have been previously reported, few have been verified in an independent cGVHD cohort. We aimed to verify the diagnostic accuracy of previously reported markers of cGVHD in a multi-centre Chronic GVHD Consortium. A total of 42 RNA and 18 protein candidate biomarkers were assessed amongst 59 cGVHD cases and 33 matched non-GVHD controls. Total RNA was isolated from PBMC, and RNA markers were quantified using PCR. Serum protein markers were quantified using ELISA. A combined 3 RNA biomarker (IRS2, PLEKHF1 and IL1R2) and 2 clinical variables (recipient CMV serostatus and conditioning regimen intensity) panel accurately (AUC 0.81) segregated cGVHD cases from controls. Other studied RNA and protein markers were not confirmed as accurate cGVHD diagnostic biomarkers. The studied markers failed to segregate higher risk cGVHD (per overall NIH 0-3 score, and overlap versus classic cGVHD status). These data support the need for multiple independent verification studies for the ultimate clinical application of cGVHD diagnostic biomarkers.

Indexed as

chronic graft versus host diseasediagnostic biomarkers

Identifiers

PMID28138397
PMCPMC5259564

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.