Evidence map›Paper›PMID 28135257›Full record

ArticleNature methods2017

One-step generation of conditional and reversible gene knockouts.

Amanda Andersson-Rolf, Roxana C Mustata, Alessandra Merenda, Jihoon Kim, Sajith Perera, Tiago Grego, Katie Andrews, Katie Tremble, José C R Silva, Juergen Fink and 2 more

Open access · greenAbstract read
In one paragraph

Article in Nature methods, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 88 citations in OpenAlex.

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  11. Epidermal growth factor receptor (EGFR) is a target of the tumor-suppressor E3 ligase FBXW7.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Amanda Andersson-RolfWellcome Trust-Medical Research Council Stem Cell Institute, University of Cambridge, Cambridge, UK.
Roxana C MustataWellcome Trust-Medical Research Council Stem Cell Institute, University of Cambridge, Cambridge, UK.
Alessandra MerendaWellcome Trust-Medical Research Council Stem Cell Institute, University of Cambridge, Cambridge, UK.
Jihoon KimWellcome Trust-Medical Research Council Stem Cell Institute, University of Cambridge, Cambridge, UK.
Sajith PereraWellcome Trust Sanger Institute, Wellcome Genome Campus, Cambridge, UK.
Tiago GregoWellcome Trust Sanger Institute, Wellcome Genome Campus, Cambridge, UK.
Katie AndrewsWellcome Trust Sanger Institute, Wellcome Genome Campus, Cambridge, UK.
Katie TrembleWellcome Trust-Medical Research Council Stem Cell Institute, University of Cambridge, Cambridge, UK.
José C R SilvaWellcome Trust-Medical Research Council Stem Cell Institute, University of Cambridge, Cambridge, UK.
Juergen FinkWellcome Trust-Medical Research Council Stem Cell Institute, University of Cambridge, Cambridge, UK.
William C SkarnesWellcome Trust Sanger Institute, Wellcome Genome Campus, Cambridge, UK.
Bon-Kyoung KooWellcome Trust-Medical Research Council Stem Cell Institute, University of Cambridge, Cambridge, UK.
Wellcome/MRC Cambridge Stem Cell Institute · GBWellcome Sanger Institute · GBMedical Research Council · GBUniversity of Cambridge · GB

Funding

Medical Research Council MC_PC_12009Wellcome Trust
6 · The paper itself

Abstract

Loss-of-function studies are key for investigating gene function, and CRISPR technology has made genome editing widely accessible in model organisms and cells. However, conditional gene inactivation in diploid cells is still difficult to achieve. Here, we present CRISPR-FLIP, a strategy that provides an efficient, rapid and scalable method for biallelic conditional gene knockouts in diploid or aneuploid cells, such as pluripotent stem cells, 3D organoids and cell lines, by co-delivery of CRISPR-Cas9 and a universal conditional intronic cassette.

Indexed as

Animalsbeta CateninCell LineClustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Cas SystemsEmbryonic Stem CellsGene EditingGene Knockout TechniquesGenomeHEK293 CellsHumansMicebeta CateninCTNNB1 protein, mouse

Identifiers

PMID28135257
PMCPMC5777571
OpenAlexW2582559254

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.