Evidence map›Paper›PMID 28134613›Full record

ArticleeLife2017

DNA methylation and gene expression changes derived from assisted reproductive technologies can be decreased by reproductive fluids.

Sebastian Canovas, Elena Ivanova, Raquel Romar, Soledad García-Martínez, Cristina Soriano-Úbeda, Francisco A García-Vázquez, Heba Saadeh, Simon Andrews, Gavin Kelsey, Pilar Coy

Open access · goldAbstract readComparative Study
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
25.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 188 citations in OpenAlex.

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  15. Magnetic-Assisted Control of Eggs and Embryos via Zona Pellucida-Linked Nanoparticles.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
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8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Sebastian CanovasPhysiology of Reproduction Group, Departamento de Fisiología, Facultad de Veterinaria, Universidad de Murcia-Campus Mare Nostrum, Murcia, Spain.ORCID 0000-0003-4190-6258
Elena IvanovaEpigenetics Programme, The Babraham Institute, Cambridge, United Kingdom.
Raquel RomarPhysiology of Reproduction Group, Departamento de Fisiología, Facultad de Veterinaria, Universidad de Murcia-Campus Mare Nostrum, Murcia, Spain.
Soledad García-MartínezPhysiology of Reproduction Group, Departamento de Fisiología, Facultad de Veterinaria, Universidad de Murcia-Campus Mare Nostrum, Murcia, Spain.
Cristina Soriano-ÚbedaPhysiology of Reproduction Group, Departamento de Fisiología, Facultad de Veterinaria, Universidad de Murcia-Campus Mare Nostrum, Murcia, Spain.
Francisco A García-VázquezPhysiology of Reproduction Group, Departamento de Fisiología, Facultad de Veterinaria, Universidad de Murcia-Campus Mare Nostrum, Murcia, Spain.
Heba SaadehEpigenetics Programme, The Babraham Institute, Cambridge, United Kingdom.
Simon AndrewsBioinformatics Group, The Babraham Institute, Cambridge, United Kingdom.
Gavin KelseyEpigenetics Programme, The Babraham Institute, Cambridge, United Kingdom.ORCID 0000-0002-9762-5634
Pilar CoyPhysiology of Reproduction Group, Departamento de Fisiología, Facultad de Veterinaria, Universidad de Murcia-Campus Mare Nostrum, Murcia, Spain.ORCID 0000-0002-3943-1890
Instituto Murciano de Investigación Biosanitaria · ESBabraham Institute · GBUniversity of Jordan · JO

Funding

Medical Research Council MR/K011332/1
6 · The paper itself

Abstract

The number of children born since the origin of Assisted Reproductive Technologies (ART) exceeds 5 million. The majority seem healthy, but a higher frequency of defects has been reported among ART-conceived infants, suggesting an epigenetic cost. We report the first whole-genome DNA methylation datasets from single pig blastocysts showing differences between in vivo and in vitro produced embryos. Blastocysts were produced in vitro either without (C-IVF) or in the presence of natural reproductive fluids (Natur-IVF). Natur-IVF embryos were of higher quality than C-IVF in terms of cell number and hatching ability. RNA-Seq and DNA methylation analyses showed that Natur-IVF embryos have expression and methylation patterns closer to in vivo blastocysts. Genes involved in reprogramming, imprinting and development were affected by culture, with fewer aberrations in Natur-IVF embryos. Methylation analysis detected methylated changes in C-IVF, but not in Natur-IVF, at genes whose methylation could be critical, such as IGF2R and NNAT.

Indexed as

DNA MethylationGene ExpressionAnimalsBlastocystCongenital AbnormalitiesCulture MediaDisease Models, AnimalDNAGene Expression ProfilingReproductive Techniques, AssistedSwineCulture MediaDNAblastocystdevelopmental biologyepigeneticsimprintingIn vitro fertilizationpigreproductive secretionsstem cells

Identifiers

PMID28134613
PMCPMC5340525
OpenAlexW2582590799

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.