Evidence map›Paper›PMID 28134340›Full record

ArticleNature communications2017

KIF13B establishes a CAV1-enriched microdomain at the ciliary transition zone to promote Sonic hedgehog signalling.

Kenneth B Schou, Johanne B Mogensen, Stine K Morthorst, Brian S Nielsen, Aiste Aleliunaite, Andrea Serra-Marques, Nicoline Fürstenberg, Sophie Saunier, Albane A Bizet, Iben R Veland and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 68 citations in OpenAlex.

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  17. Endogenous Tagging of Ciliary Genes in Human RPE1 Cells for Live-Cell Imaging.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 4 countries.

Kenneth B SchouDepartment of Biology, Section of Cell Biology and Physiology, The August Krogh Building, University of Copenhagen, Universitetsparken 13, Copenhagen OE DK-2100, Denmark.
Johanne B MogensenDepartment of Biology, Section of Cell Biology and Physiology, The August Krogh Building, University of Copenhagen, Universitetsparken 13, Copenhagen OE DK-2100, Denmark.
Stine K MorthorstDepartment of Biology, Section of Cell Biology and Physiology, The August Krogh Building, University of Copenhagen, Universitetsparken 13, Copenhagen OE DK-2100, Denmark.
Brian S NielsenDepartment of Biology, Section of Cell Biology and Physiology, The August Krogh Building, University of Copenhagen, Universitetsparken 13, Copenhagen OE DK-2100, Denmark.
Aiste AleliunaiteDepartment of Biology, Section of Cell Biology and Physiology, The August Krogh Building, University of Copenhagen, Universitetsparken 13, Copenhagen OE DK-2100, Denmark.
Andrea Serra-MarquesCell Biology, Department of Biology, Faculty of Science, Utrecht University, Padualaan 8, CH Utrecht 3584, The Netherlands.
Nicoline FürstenbergDepartment of Biology, Section of Cell Biology and Physiology, The August Krogh Building, University of Copenhagen, Universitetsparken 13, Copenhagen OE DK-2100, Denmark.
Sophie SaunierInserm UMR-1163, Laboratory of Hereditary Kidney diseases, Paris 75015, France.
Albane A BizetInserm UMR-1163, Laboratory of Hereditary Kidney diseases, Paris 75015, France.
Iben R VelandDepartment of Biology, Section of Cell Biology and Physiology, The August Krogh Building, University of Copenhagen, Universitetsparken 13, Copenhagen OE DK-2100, Denmark.
Anna AkhmanovaCell Biology, Department of Biology, Faculty of Science, Utrecht University, Padualaan 8, CH Utrecht 3584, The Netherlands.ORCID 0000-0002-9048-8614
Søren T ChristensenDepartment of Biology, Section of Cell Biology and Physiology, The August Krogh Building, University of Copenhagen, Universitetsparken 13, Copenhagen OE DK-2100, Denmark.
Lotte B PedersenDepartment of Biology, Section of Cell Biology and Physiology, The August Krogh Building, University of Copenhagen, Universitetsparken 13, Copenhagen OE DK-2100, Denmark.ORCID 0000-0002-9749-3758
University of Copenhagen · DKDélégation Paris 5 · FRUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ciliary membrane composition is controlled by transition zone (TZ) proteins such as RPGRIP1, RPGRIPL and NPHP4, which are vital for balanced coordination of diverse signalling systems like the Sonic hedgehog (Shh) pathway. Activation of this pathway involves Shh-induced ciliary accumulation of Smoothened (SMO), which is disrupted by disease-causing mutations in TZ components. Here we identify kinesin-3 motor protein KIF13B as a novel member of the RPGRIP1N-C2 domain-containing protein family and show that KIF13B regulates TZ membrane composition and ciliary SMO accumulation. KIF13B is upregulated during ciliogenesis and is recruited to the ciliary base by NPHP4, which binds to two distinct sites in the KIF13B tail region, including an RPGRIP1N-C2 domain. KIF13B and NPHP4 are both essential for establishment of a CAV1 membrane microdomain at the TZ, which in turn is required for Shh-induced ciliary SMO accumulation. Thus KIF13B is a novel regulator of ciliary TZ configuration, membrane composition and Shh signalling.

Indexed as

AnimalsCaveolin 1Cell LineCell MembraneCiliaComputational BiologyGene Expression ProfilingGene Expression RegulationGene Knockout TechniquesHedgehog ProteinsHEK293 CellsHumansKinesinsMembrane ProteinsMiceNIH 3T3 CellsCAV1 protein, humanCaveolin 1GLI1 protein, humanHedgehog ProteinsKIF13B protein, humanKIF13b protein, mouseKinesinsMembrane ProteinsNPHP4 protein, humanNPHP4 protein, mouseProteinsSHH protein, humanSmoothened ReceptorSMO protein, humanZinc Finger Protein GLI1

Identifiers

PMID28134340
PMCPMC5290278
OpenAlexW2581531657

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.