Evidence map›Paper›PMID 28133765›Full record

ReviewBioEssays : news and reviews in molecular, cellular and developmental biology2017

Boundaries of loop domains (insulators): Determinants of chromosome form and function in multicellular eukaryotes.

Darya Chetverina, Miki Fujioka, Maksim Erokhin, Pavel Georgiev, James B Jaynes, Paul Schedl

Abstract readReview
In one paragraph

Review in BioEssays : news and reviews in molecular, cellular and developmental biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. ThebioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Article
  9. Multiple Roles of dXNP and dADD1-International journal of molecular sciences · 2023
    Review
  10. Article
  11. Polycomb Recruiters Inside and Outside of the Repressed Domains.International journal of molecular sciences · 2023
    Review
  12. Transcriptional Readthrough Interrupts Boundary Function in Drosophila.International journal of molecular sciences · 2023
    Article
  13. Boundary Bypass Activity in thebioRxiv : the preprint server for biology · 2023
    Article
  14. Transcriptional read through interrupts boundary function in Drosophila.bioRxiv : the preprint server for biology · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Integrity of a heterochromatic domain ensured by its boundary elements.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Darya ChetverinaDepartment of the Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.
Miki FujiokaDepartment of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Maksim ErokhinDepartment of the Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.
Pavel GeorgievDepartment of the Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.
James B JaynesDepartment of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Paul SchedlDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA.

Funding

MOLECULAR AND GENETIC ANALYSIS OF CHROMATIN STRUCTURER01GM043432 · NIGMS · PRINCETON UNIVERSITY · PI SCHEDL, PAUL D · 1990 to 2017
$5.8M
TRANSCRIPTIONAL REGULATORY MECHANISMS DURING DEVELOPMENTR01GM050231 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI JAYNES, JAMES B · 1995 to 2013
$3.3M
Insulators: Determinants of chromosome topology and regulatory interactionsR01GM117458 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI JAYNES, JAMES B · 2016 to 2019
$1.2M
NIGMS NIH HHS R01 GM043432NIGMS NIH HHS R01 GM050231NIGMS NIH HHS R01 GM117458
6 · The paper itself

Abstract

Chromosomes in multicellular animals are subdivided into a series of looped domains. In addition to being the underlying principle for organizing the chromatin fiber, looping is critical for processes ranging from gene regulation to recombination and repair. The subdivision of chromosomes into looped domains depends upon a special class of architectural elements called boundaries or insulators. These elements are distributed throughout the genome and are ubiquitous building blocks of chromosomes. In this review, we focus on features of boundaries that are critical in determining the topology of the looped domains and their genetic properties. We highlight the properties of fly boundaries that are likely to have an important bearing on the organization of looped domains in vertebrates, and discuss the functional consequences of the observed similarities and differences.

Indexed as

Insulator ElementsAnimalsChromatinChromosomes, MammalianEukaryotaGene Expression RegulationHumansInverted Repeat SequencesSequence Homology, Nucleic AcidChromatinchromosome architecturegene regulationinsulatorslooped domainloop topologyTADs

Identifiers

PMID28133765
PMCPMC5536339

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.