Evidence map›Paper›PMID 28132836›Full record

ArticleCell host & microbe2017

Heme Oxygenase 2 Binds Myristate to Regulate Retrovirus Assembly and TLR4 Signaling.

Yiping Zhu, Shukun Luo, Yosef Sabo, Cheng Wang, Liang Tong, Stephen P Goff

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

  1. Anemia, Iron Status, and HIV: A Systematic Review of the Evidence.Advances in nutrition (Bethesda, Md.) · 2020
    Pooled it
  2. Review
  3. Article
  4. Unconventional posttranslational modification in innate immunity.Cellular and molecular life sciences : CMLS · 2024
    Review
  5. Review
  6. Article
  7. Article
  8. Heme-heme oxygenase-2 reduces the atherosclerosis by preventing inflammation.Current research in pharmacology and drug discovery · 2023
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yiping Zhu *Howard Hughes Medical Institute, Department of Biochemistry and Molecular Biophysics, and Department of Microbiology and Immunology, Columbia University, New York, NY 10032, USA.
Shukun Luo *Department of Biological Sciences, Columbia University, New York, NY 10027, USA.
Yosef SaboHoward Hughes Medical Institute, Department of Biochemistry and Molecular Biophysics, and Department of Microbiology and Immunology, Columbia University, New York, NY 10032, USA.
Cheng WangHoward Hughes Medical Institute, Department of Biochemistry and Molecular Biophysics, and Department of Microbiology and Immunology, Columbia University, New York, NY 10032, USA.
Liang TongDepartment of Biological Sciences, Columbia University, New York, NY 10027, USA.
Stephen P GoffHoward Hughes Medical Institute, Department of Biochemistry and Molecular Biophysics, and Department of Microbiology and Immunology, Columbia University, New York, NY 10032, USA.
Columbia University · USHoward Hughes Medical Institute · US

Funding

Structural and functional studies of mRNA processing, stability and quality controlR35GM118093 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI LIANG TONG · 2016 to 2026
$8.5M
Mechanisms of Silencing of Retroviral DNAs in Embryonic Cell LinesR01CA030488 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI GOFF, STEPHEN PAINE · 1985 to 2024
$4.3M
Regulatuion of HIV-1 Gene Expression in Latency by YY1, RuvB2, and ZAPR01AI106629 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GOFF, STEPHEN PAINE · 2013 to 2015
$600k
Howard Hughes Medical InstituteNCI NIH HHS R01 CA030488NIAID NIH HHS R01 AI106629NIGMS NIH HHS R35 GM118093
6 · The paper itself

Abstract

N-myristoylation is the covalent attachment of myristic acid to the N terminus of proteins in eukaryotic cells. The matrix domain (MA) of HIV-1 Gag protein is N-myristoylated and plays an important role in virus budding. In screening for host factors that interact with HIV-1 MA, we found that heme oxygenase (HO-2) specifically binds the myristate moiety of Gag. HO-2 was also found to bind TRAM, an adaptor protein for Toll-like receptor 4 (TLR4), and thereby impact both virus replication and cellular inflammatory responses. A crystal structure revealed that HO-2 binds myristate via a hydrophobic channel adjacent to the heme-binding pocket. Inhibiting HO-2 expression, or blocking myristate binding with a heme analog, led to marked increases in virus production. HO-2 deficiency caused hyperresponsive TRAM-dependent TLR4 signaling and hypersensitivity to the TLR4 ligand lipopolysaccharide. Thus, HO-2 is a cellular myristate-binding protein that negatively regulates both virus replication and host inflammatory responses.

Indexed as

Virus AssemblyAdaptor Proteins, Signal Transducinggag Gene Products, Human Immunodeficiency VirusHEK293 CellsHeme Oxygenase (Decyclizing)HIV-1Host-Pathogen InteractionsHumansLipopolysaccharidesMyristic AcidSignal TransductionToll-Like Receptor 4VirionVirus ReplicationAdaptor Proteins, Signal Transducinggag Gene Products, Human Immunodeficiency Virusheme oxygenase-2Heme Oxygenase (Decyclizing)LipopolysaccharidesMyristic AcidTICAM2 protein, humanTLR4 protein, humanToll-Like Receptor 4heme oxygenase 2HIV-1lipopolysaccharideMyristoylationmyristoyl-binding proteinretrovirus GagTLR4TRAM

Identifiers

PMID28132836
PMCPMC5300893
OpenAlexW2582218358

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.