Evidence map›Paper›PMID 28131722›Full record

ArticleJournal of biomedical informatics2017

Development and empirical user-centered evaluation of semantically-based query recommendation for an electronic health record search engine.

David A Hanauer, Danny T Y Wu, Lei Yang, Qiaozhu Mei, Katherine B Murkowski-Steffy, V G Vinod Vydiswaran, Kai Zheng

Abstract read
In one paragraph

Article in Journal of biomedical informatics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Clinical Information Retrieval: A Literature Review.Journal of healthcare informatics research · 2024
    Article
  4. Article
  5. quEHRy: a question answering system to query electronic health records.Journal of the American Medical Informatics Association : JAMIA · 2023
    Article
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  14. Article
  15. A Semantic Parsing Method for Mapping Clinical Questions to Logical Forms.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

David A HanauerDepartment of Pediatrics, University of Michigan Medical School, 5312 CC, SPC 5940, 1500 East Medical Center Drive, Ann Arbor, MI 48109, USA; School of Information, University of Michigan, 105 South State Street, Ann Arbor, MI 48109, USA. Electronic address: hanauer@med.umich.edu.
Danny T Y WuSchool of Information, University of Michigan, 105 South State Street, Ann Arbor, MI 48109, USA; Department of Pediatrics, University of Michigan Medical School, 5312 CC, SPC 5940, 1500 East Medical Center Drive, Ann Arbor, MI 48109, USA. Electronic address: tzuyu@umich.edu.
Lei YangSchool of Information, University of Michigan, 105 South State Street, Ann Arbor, MI 48109, USA. Electronic address: yangle@umich.edu.
Qiaozhu MeiSchool of Information, University of Michigan, 105 South State Street, Ann Arbor, MI 48109, USA; Department of Electrical Engineering and Computer Science, University of Michigan, 2260 Hayward Street, Ann Arbor, MI 48109, USA. Electronic address: qmei@umich.edu.
Katherine B Murkowski-SteffyDepartment of Health Management and Policy, School of Public Health, 1415 Washington Heights, Ann Arbor, MI 48109, USA. Electronic address: kbmurko@umich.edu.
V G Vinod VydiswaranDepartment of Learning Health Sciences, University of Michigan Medical School, 1111 East Catherine Street, Ann Arbor, MI 48109, USA; School of Information, University of Michigan, 105 South State Street, Ann Arbor, MI 48109, USA. Electronic address: vgvinodv@med.umich.edu.
Kai ZhengDepartment of Health Management and Policy, School of Public Health, 1415 Washington Heights, Ann Arbor, MI 48109, USA; School of Information, University of Michigan, 105 South State Street, Ann Arbor, MI 48109, USA. Electronic address: kzheng@umich.edu.

Funding

Michigan Institute for Clinical and Health Research (MCHR)UL1TR000433 · NCATS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MASHOUR, GEORGE ALEXANDER · 2012 to 2016
$49.9M
NCATS NIH HHS UL1 TR000433NLM NIH HHS HHSN276201000032C
6 · The paper itself

Abstract

objectiveThe utility of biomedical information retrieval environments can be severely limited when users lack expertise in constructing effective search queries. To address this issue, we developed a computer-based query recommendation algorithm that suggests semantically interchangeable terms based on an initial user-entered query. In this study, we assessed the value of this approach, which has broad applicability in biomedical information retrieval, by demonstrating its application as part of a search engine that facilitates retrieval of information from electronic health records (EHRs). MATERIALS AND

methodsThe query recommendation algorithm utilizes MetaMap to identify medical concepts from search queries and indexed EHR documents. Synonym variants from UMLS are used to expand the concepts along with a synonym set curated from historical EHR search logs. The empirical study involved 33 clinicians and staff who evaluated the system through a set of simulated EHR search tasks. User acceptance was assessed using the widely used technology acceptance model.

resultsThe search engine's performance was rated consistently higher with the query recommendation feature turned on vs. off. The relevance of computer-recommended search terms was also rated high, and in most cases the participants had not thought of these terms on their own. The questions on perceived usefulness and perceived ease of use received overwhelmingly positive responses. A vast majority of the participants wanted the query recommendation feature to be available to assist in their day-to-day EHR search tasks. DISCUSSION AND

conclusionChallenges persist for users to construct effective search queries when retrieving information from biomedical documents including those from EHRs. This study demonstrates that semantically-based query recommendation is a viable solution to addressing this challenge.

Indexed as

AlgorithmsElectronic Health RecordsNatural Language ProcessingSearch EngineHumansInformation Storage and RetrievalSemanticsElectronic health records (E05.318.308.940.968.625.500)Information retrieval systems (L01.700.508.300)Query expansionQuery recommendationSearch engine (L01.470.875)Unified Medical Language System (L01.453.245.945.800)

Identifiers

PMID28131722
PMCPMC5378386

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.