Evidence map›Paper›PMID 28131313›Full record

ArticleMolecular therapy. Nucleic acids2016

DNA Minicircle Technology Improves Purity of Adeno-associated Viral Vector Preparations.

Maria Schnödt, Marco Schmeer, Barbara Kracher, Christa Krüsemann, Laura Escalona Espinosa, Anja Grünert, Thomas Fuchsluger, Anja Rischmüller, Martin Schleef, Hildegard Büning

Abstract read
In one paragraph

Article in Molecular therapy. Nucleic acids, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Stowaways in the cargo: Contaminating nucleic acids in rAAV preparations for gene therapy.Molecular therapy : the journal of the American Society of Gene Therapy · 2023
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. AAV vectors: The Rubik's cube of human gene therapy.Molecular therapy : the journal of the American Society of Gene Therapy · 2022
    Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Maria SchnödtCenter for Molecular Medicine Cologne (CMMC), University of Cologne, Cologne, Germany; German Center for Infection Research (DZIF), partner sites Bonn-Cologne and Hannover-Braunschweig, Germany; Department I of Internal Medicine, University Hospital Cologne, Cologne, Germany.
Marco SchmeerPlasmid Factory, Bielefeld, Germany.
Barbara KracherDepartment of Plant-Microbe Interactions, Max-Planck Institute for Plant Breeding Research, Cologne, Germany.
Christa KrüsemannPlasmid Factory, Bielefeld, Germany.
Laura Escalona EspinosaCenter for Molecular Medicine Cologne (CMMC), University of Cologne, Cologne, Germany; Department I of Internal Medicine, University Hospital Cologne, Cologne, Germany.
Anja GrünertClinic for Ophthalmology, University Hospital Erlangen, Erlangen, Germany.
Thomas FuchslugerClinic for Ophthalmology, University Hospital Erlangen, Erlangen, Germany.
Anja RischmüllerPlasmid Factory, Bielefeld, Germany.
Martin SchleefPlasmid Factory, Bielefeld, Germany. Electronic address: Martin.schleef@plasmidfactory.com.
Hildegard BüningCenter for Molecular Medicine Cologne (CMMC), University of Cologne, Cologne, Germany; German Center for Infection Research (DZIF), partner sites Bonn-Cologne and Hannover-Braunschweig, Germany; Department I of Internal Medicine, University Hospital Cologne, Cologne, Germany; Institute of Experimental Hematology, Hannover Medical School, Hannover, Germany. Electronic address: buening.hildegard@mh-hannover.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adeno-associated viral (AAV) vectors are considered as one of the most promising delivery systems in human gene therapy. In addition, AAV vectors are frequently applied tools in preclinical and basic research. Despite this success, manufacturing pure AAV vector preparations remains a difficult task. While empty capsids can be removed from vector preparations owing to their lower density, state-of-the-art purification strategies as of yet failed to remove antibiotic resistance genes or other plasmid backbone sequences. Here, we report the development of minicircle (MC) constructs to replace AAV vector and helper plasmids for production of both, single-stranded (ss) and self-complementary (sc) AAV vectors. As bacterial backbone sequences are removed during MC production, encapsidation of prokaryotic plasmid backbone sequences is avoided. This is of particular importance for scAAV vector preparations, which contained an unproportionally high amount of plasmid backbone sequences (up to 26.1% versus up to 2.9% (ssAAV)). Replacing standard packaging plasmids by MC constructs not only allowed to reduce these contaminations below quantification limit, but in addition improved transduction efficiencies of scAAV preparations up to 30-fold. Thus, MC technology offers an easy to implement modification of standard AAV packaging protocols that significantly improves the quality of AAV vector preparations.

Indexed as

AAV vectorsDNA impuritiesMinicircleVector productionVector quality

Identifiers

PMID28131313
PMCPMC5023404

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.