Evidence map›Paper›PMID 28130840›Full record

ArticleFEBS letters2017

Investigating the nucleic acid interactions of histone-derived antimicrobial peptides.

Sukin Sim, Penny Wang, Brittany N Beyer, Kara J Cutrona, Mala L Radhakrishnan, Donald E Elmore

Open access · greenAbstract readLetter
In one paragraph

Article in FEBS letters, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Combating Bacterial Infections with Vitamin D-Induced Antimicrobial Peptides.Advances in experimental medicine and biology · 2026
    Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Review
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  14. Article
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  17. Article
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  19. Article
  20. Recent Developments and Applications of the MMPBSA Method.Frontiers in molecular biosciences · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Sukin SimDepartment of Chemistry, Wellesley College, MA, USA.
Penny WangDepartment of Chemistry, Wellesley College, MA, USA.
Brittany N BeyerDepartment of Chemistry, Wellesley College, MA, USA.
Kara J CutronaDepartment of Chemistry, Wellesley College, MA, USA.
Mala L RadhakrishnanDepartment of Chemistry, Wellesley College, MA, USA.
Donald E ElmoreDepartment of Chemistry, Wellesley College, MA, USA.
Wellesley College · US

Funding

YEAST ER MOLECULAR CHAPERONE TRANSLOCATION: GENOME DATABANK HOMOLOGSP41RR006009 · NCRR · MELLON PITTS CORPORATION (MPC CORP) · PI KNOLL, ERIC · 1990 to 2011
$22.0M
Characterization and Design of Histone-Derived Antimicrobial PeptidesR15AI079685 · NIAID · WELLESLEY COLLEGE · PI ELMORE, DONALD E. · 2010 to 2015
$630k
NCRR NIH HHS P41 RR006009NIAID NIH HHS R15 AI079685
6 · The paper itself

Abstract

While many antimicrobial peptides (AMPs) disrupt bacterial membranes, some translocate into bacteria and interfere with intracellular processes. Buforin II and DesHDAP1 are thought to kill bacteria by interacting with nucleic acids. Here, molecular modeling and experimental measurements are used to show that neither nucleic acid binding peptide selectively binds DNA sequences. Simulations and experiments also show that changing lysines to arginines enhances DNA binding, suggesting that including additional guanidinium groups is a potential strategy to engineer more potent AMPs. Moreover, the lack of binding specificity may make it more difficult for bacteria to evolve resistance to these and other similar AMPs.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionAnimalsAnti-Bacterial AgentsAnuraArginineDNA, BacterialHistonesKineticsLysineMolecular Dynamics SimulationMolecular MimicryProtein BindingProteinsProtein Structure, SecondaryStructure-Activity RelationshipAnti-Bacterial AgentsArgininebuforin IIDNA, BacterialHistonesLysineProteinsantimicrobial peptideelectrostatics calculationsmolecular dynamicsnucleic acid

Identifiers

PMID28130840
PMCPMC5371511
OpenAlexW2582965223

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.