Evidence map›Paper›PMID 28130550›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Control of DEMETER DNA demethylase gene transcription in male and female gamete companion cells in

Jin-Sup Park, Jennifer M Frost, Kyunghyuk Park, Hyonhwa Ohr, Guen Tae Park, Seohyun Kim, Hyunjoo Eom, Ilha Lee, Janie S Brooks, Robert L Fischer and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 72 citations in OpenAlex.

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  14. Review
  15. Annual review of plant biology · 2023
    Review
  16. DNA methylation dynamics during germline development.Journal of integrative plant biology · 2022
    Review
  17. Article
  18. Comparative Seeds Storage Transcriptome Analysis ofInternational journal of molecular sciences · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Jin-Sup ParkDepartment of Biological Sciences, Seoul National University, Seoul 151-747, Korea.
Jennifer M FrostDepartment of Plant and Microbial Biology, University of California, Berkeley, CA 94720.
Kyunghyuk ParkDepartment of Biological Sciences, Seoul National University, Seoul 151-747, Korea.
Hyonhwa OhrDepartment of Biological Sciences, Seoul National University, Seoul 151-747, Korea.
Guen Tae ParkDepartment of Biological Sciences, Seoul National University, Seoul 151-747, Korea.
Seohyun KimDepartment of Biological Sciences, Seoul National University, Seoul 151-747, Korea.
Hyunjoo EomDepartment of Biological Sciences, Seoul National University, Seoul 151-747, Korea.
Ilha LeeDepartment of Biological Sciences, Seoul National University, Seoul 151-747, Korea.
Janie S BrooksDepartment of Science, Seoul Foreign School, Seoul 120-823, Korea.
Robert L FischerDepartment of Plant and Microbial Biology, University of California, Berkeley, CA 94720; rfischer@berkeley.edu yhc@snu.ac.kr.
Yeonhee ChoiDepartment of Biological Sciences, Seoul National University, Seoul 151-747, Korea; rfischer@berkeley.edu yhc@snu.ac.kr.
Seoul National University · KRUniversity of California, Berkeley · US

Funding

Regulation and Function of DNA Demethylation in ArabidopsisR01GM069415 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI FISCHER, ROBERT L, ZILBERMAN, DANIEL · 2004 to 2016
$3.8M
Genome Sequencer FLXS10RR029668 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI NGAI, JOHN J. · 2010 to 2010
$623k
Illumina Sequencer to Facilitate Functional Genomics at BerkeleyS10RR027303 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI TAYLOR, JOHN W. · 2010 to 2010
$500k
NCRR NIH HHS S10 RR027303NCRR NIH HHS S10 RR029668NIGMS NIH HHS R01 GM069415
6 · The paper itself

Abstract

The DEMETER (DME) DNA glycosylase initiates active DNA demethylation via the base-excision repair pathway and is vital for reproduction in

Indexed as

Gene Expression Regulation, PlantArabidopsisArabidopsis ProteinsDNA GlycosylasesDNA MethylationDNA Transposable ElementsEndospermGenomic ImprintingGerm CellsMutationN-Glycosyl HydrolasesOvulePollenPromoter Regions, GeneticTrans-ActivatorsTranscription, GeneticArabidopsis ProteinsDEMETER protein, ArabidopsisDNA GlycosylasesDNA Transposable ElementsN-Glycosyl HydrolasesTrans-Activatorscell-specific transcriptioncentral cellDNA demethylationDNA enhancer elementsvegetative cell

Identifiers

PMID28130550
PMCPMC5338364
OpenAlexW2580815116

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.