Evidence map›Paper›PMID 28127554›Full record

ArticleBioMed research international2017

Comparative Metabolome Profile between Tobacco and Soybean Grown under Water-Stressed Conditions.

Roel C Rabara, Prateek Tripathi, Paul J Rushton

Open access · hybridAbstract readComparative Study
In one paragraph

Article in BioMed research international, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
12.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. O-Acetyl-Serine Supplementation Enhances Insulin Secretion and Improves Postprandial Glycaemia in Lean and Prediabetic Mice.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  3. Article
  4. Review
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  8. Article
  9. Article
  10. Review
  11. Metabolomic Analysis of the Response ofInternational journal of molecular sciences · 2023
    Article
  12. Metabolomics as a Prospective Tool for Soybean (Current issues in molecular biology · 2022
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. A cytosolic oxidation-reduction cycle in plant leaves.Journal of experimental botany · 2021
    Article
  19. Metabolite Analysis of Jerusalem Artichoke (International journal of molecular sciences · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Roel C RabaraTexas A&M AgriLife Research and Extension Center, Dallas, TX 75252, USA.ORCID 0000-0001-8608-7060
Prateek TripathiThe Scripps Research Institute, La Jolla, CA 92037, USA.ORCID 0000-0002-0958-2428
Paul J RushtonTexas A&M AgriLife Research and Extension Center, Dallas, TX 75252, USA.
Scripps Research Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding how plants respond to water deficit is important in order to develop crops tolerant to drought. In this study, we compare two large metabolomics datasets where we employed a nontargeted metabolomics approach to elucidate metabolic pathways perturbed by progressive dehydration in tobacco and soybean plants. The two datasets were created using the same strategy to create water deficit conditions and an identical metabolomics pipeline. Comparisons between the two datasets therefore reveal common responses between the two species, responses specific to one of the species, responses that occur in both root and leaf tissues, and responses that are specific to one tissue. Stomatal closure is the immediate response of the plant and this did not coincide with accumulation of abscisic acid. A total of 116 and 140 metabolites were observed in tobacco leaves and roots, respectively, while 241 and 207 were observed in soybean leaves and roots, respectively. Accumulation of metabolites is significantly correlated with the extent of dehydration in both species. Among the metabolites that show increases that are restricted to just one plant, 4-hydroxy-2-oxoglutaric acid (KHG) in tobacco roots and coumestrol in soybean roots show the highest tissue-specific accumulation. The comparisons of these two large nontargeted metabolomics datasets provide novel information and suggest that KHG will be a useful marker for drought stress for some members of Solanaceae and coumestrol for some legume species.

Indexed as

BiomarkersCoumestrolDehydrationDroughtsGlycine maxKetoglutaric AcidsMetabolic Networks and PathwaysMetabolomeNicotianaPlant LeavesPlant Roots2-keto-4-hydroxyglutarateBiomarkersCoumestrolKetoglutaric Acids

Identifiers

PMID28127554
PMCPMC5239840
OpenAlexW2564603909

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.