ArticlePloS one2017
Complete Chloroplast Genomes of Erianthus arundinaceus and Miscanthus sinensis: Comparative Genomics and Evolution of the Saccharum Complex.
Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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13 citing papers in PubMed.
- Haplotype-resolved genome assembly sheds light on the evolutionary history of autohexaploid Tripidium arundinaceum.Nature communications · 2026Article
- The repeatome landscape in the "Frontiers in plant science · 2026Article
- Comparative chloroplast genomics of wild-type Panicum miliaceum cv. ATL1 and its MBMC plant biology · 2025Article
- Identifying candidate genes for sugar accumulation in sugarcane: an integrative approach.BMC genomics · 2024Article
- Evaluation of genome size and phylogenetic relationships of the3 Biotech · 2022Article
- Comparative Analysis of Chloroplast Genome inInternational journal of molecular sciences · 2022Article
- Erianthus germplasm collection in Thailand: genetic structure and phylogenetic aspects of tetraploid and hexaploid accessions.BMC plant biology · 2022Article
- Chromosomal Characterization ofInternational journal of molecular sciences · 2021Article
- Comparative analysis and phylogenetic investigation of Hong Kong Ilex chloroplast genomes.Scientific reports · 2021Article
- Assessment of Gene Flow to Wild Relatives and Nutritional Composition of Sugarcane in Brazil.Frontiers in bioengineering and biotechnology · 2020Article
- Whole chloroplast genome and gene locus phylogenies reveal the taxonomic placement and relationship of Tripidium (Panicoideae: Andropogoneae) to sugarcane.BMC evolutionary biology · 2019Article
- The complete chloroplast genome sequences of little millet (Mitochondrial DNA. Part B, Resources · 2018Article
- The complete chloroplast genome sequence of wild oat,Mitochondrial DNA. Part B, Resources · 2018Article
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4 authors.
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Abstract
The genera Erianthus and Miscanthus, both members of the Saccharum complex, are of interest as potential resources for sugarcane improvement and as bioenergy crops. Recent studies have mainly focused on the conservation and use of wild accessions of these genera as breeding materials. However, the sequence data are limited, which hampers the studies of phylogenetic relationships, population structure, and evolution of these grasses. Here, we determined the complete chloroplast genome sequences of Erianthus arundinaceus and Miscanthus sinensis by using 454 GS FLX pyrosequencing and Sanger sequencing. Alignment of the E. arundinaceus and M. sinensis chloroplast genome sequences with the known sequence of Saccharum officinarum demonstrated a high degree of conservation in gene content and order. Using the data sets of 76 chloroplast protein-coding genes, we performed phylogenetic analysis in 40 taxa including E. arundinaceus and M. sinensis. Our results show that S. officinarum is more closely related to M. sinensis than to E. arundinaceus. We estimated that E. arundinaceus diverged from the subtribe Sorghinae before the divergence of Sorghum bicolor and the common ancestor of S. officinarum and M. sinensis. This is the first report of the phylogenetic and evolutionary relationships inferred from maternally inherited variation in the Saccharum complex. Our study provides an important framework for understanding the phylogenetic relatedness of the economically important genera Erianthus, Miscanthus, and Saccharum.
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