Evidence map›Paper›PMID 28123428›Full record

ArticleNeural regeneration research2016

Key genes expressed in different stages of spinal cord ischemia/reperfusion injury.

Jian-An Li, Chun-Fang Zan, Peng Xia, Chang-Jun Zheng, Zhi-Ping Qi, Chun-Xu Li, Zhi-Gang Liu, Ting-Ting Hou, Xiao-Yu Yang

Open access · goldAbstract read
In one paragraph

Article in Neural regeneration research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 28 citations in OpenAlex.

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  15. [Yiqihuoxue prescription promotes nerve regeneration by miR-124-mediated regulation of Wnt signaling in rats].Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Jian-An LiDepartment of Orthopaedics, the Second Hospital of Jilin University, Changchun, Jilin Province, China.
Chun-Fang ZanDepartment of Orthopaedics, the Second Hospital of Jilin University, Changchun, Jilin Province, China.
Peng XiaDepartment of Orthopaedics, the Second Hospital of Jilin University, Changchun, Jilin Province, China.
Chang-Jun ZhengDepartment of Orthopaedics, the Second Hospital of Jilin University, Changchun, Jilin Province, China.
Zhi-Ping QiDepartment of Orthopaedics, the Second Hospital of Jilin University, Changchun, Jilin Province, China.
Chun-Xu LiDepartment of Orthopaedics, the Second Hospital of Jilin University, Changchun, Jilin Province, China.
Zhi-Gang LiuDepartment of Orthopaedics, the Second Hospital of Jilin University, Changchun, Jilin Province, China.
Ting-Ting HouDepartment of Orthopaedics, the Second Hospital of Jilin University, Changchun, Jilin Province, China.ORCID 0000-0001-9010-2147
Xiao-Yu YangDepartment of Orthopaedics, the Second Hospital of Jilin University, Changchun, Jilin Province, China.ORCID 0000-0001-9388-3794
Second Affiliated Hospital of Jilin University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The temporal expression of microRNA after spinal cord ischemia/reperfusion injury is not yet fully understood. In the present study, we established a model of spinal cord ischemia in Sprague-Dawley rats by clamping the abdominal aorta for 90 minutes, before allowing reperfusion for 24 or 48 hours. A sham-operated group underwent surgery but the aorta was not clamped. The damaged spinal cord was removed for hematoxylin-eosin staining and RNA extraction. Neuronal degeneration and tissue edema were the most severe in the 24-hour reperfusion group, and milder in the 48-hour reperfusion group. RNA amplification, labeling, and hybridization were used to obtain the microRNA expression profiles of each group. Bioinformatics analysis confirmed four differentially expressed microRNAs (miR-22-3p, miR-743b-3p, miR-201-5p and miR-144-5p) and their common target genes (Tmem69 and Cxcl10). Compared with the sham group, miR-22-3p was continuously upregulated in all three ischemia groups but was highest in the group with no reperfusion, whereas miR-743b-3p, miR-201-5p and miR-144-5p were downregulated in the three ischemia groups. We have successfully identified the key genes expressed at different stages of spinal cord ischemia/reperfusion injury, which provide a reference for future investigations into the mechanism of spinal cord injury.

Indexed as

bioinformaticsCxcl10ischemia/reperfusion injurymicroRNAmicroRNA arraysmRNAnerve regenerationneural regenerationspinal cord injuryTmem69transcriptome

Identifiers

PMID28123428
PMCPMC5204240
OpenAlexW2579040117

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.