Evidence map›Paper›PMID 28120876›Full record

ArticleScientific reports2017

Mycofactocin-associated mycobacterial dehydrogenases with non-exchangeable NAD cofactors.

Daniel H Haft, Phillip G Pierce, Stephen J Mayclin, Amy Sullivan, Anna S Gardberg, Jan Abendroth, Darren W Begley, Isabelle Q Phan, Bart L Staker, Peter J Myler and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 26 citations in OpenAlex.

  1. A Unique Insertion Loop Facilitates Tight NADInternational journal of molecular sciences · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Occurrence, function, and biosynthesis of mycofactocin.Applied microbiology and biotechnology · 2019
    Review
  12. Article
  13. Article
  14. Review
  15. Mechanistic elucidation of the mycofactocin-biosynthetic radicalThe Journal of biological chemistry · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Daniel H HaftNational Institutes of Health (NIH), Bethesda, MD 20892, USA.
Phillip G PierceSeattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, WA 98109, USA.
Stephen J MayclinSeattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, WA 98109, USA.
Amy SullivanSeattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, WA 98109, USA.
Anna S GardbergSeattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, WA 98109, USA.
Jan AbendrothSeattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, WA 98109, USA.
Darren W BegleySeattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, WA 98109, USA.
Isabelle Q PhanSeattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, WA 98109, USA.
Bart L StakerSeattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, WA 98109, USA.
Peter J MylerSeattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, WA 98109, USA.
Vasilios M MarathiasSeattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, WA 98109, USA.
Donald D LorimerSeattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, WA 98109, USA.
Thomas E EdwardsSeattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, WA 98109, USA.
Center for Infectious Disease Research · USBeryllium (United States) · USNational Institutes of Health · US

Funding

NIAID NIH HHS HHSN272200700057CNIAID NIH HHS HHSN272201200025C
6 · The paper itself

Abstract

During human infection, Mycobacterium tuberculosis (Mtb) survives the normally bacteriocidal phagosome of macrophages. Mtb and related species may be able to combat this harsh acidic environment which contains reactive oxygen species due to the mycobacterial genomes encoding a large number of dehydrogenases. Typically, dehydrogenase cofactor binding sites are open to solvent, which allows NAD/NADH exchange to support multiple turnover. Interestingly, mycobacterial short chain dehydrogenases/reductases (SDRs) within family TIGR03971 contain an insertion at the NAD binding site. Here we present crystal structures of 9 mycobacterial SDRs in which the insertion buries the NAD cofactor except for a small portion of the nicotinamide ring. Line broadening and STD-NMR experiments did not show NAD or NADH exchange on the NMR timescale. STD-NMR demonstrated binding of the potential substrate carveol, the potential product carvone, the inhibitor tricyclazol, and an external redox partner 2,6-dichloroindophenol (DCIP). Therefore, these SDRs appear to contain a non-exchangeable NAD cofactor and may rely on an external redox partner, rather than cofactor exchange, for multiple turnover. Incidentally, these genes always appear in conjunction with the mftA gene, which encodes the short peptide MftA, and with other genes proposed to convert MftA into the external redox partner mycofactocin.

Indexed as

2,6-DichloroindophenolBinding SitesCoenzymesCrystallography, X-RayCyclohexane MonoterpenesHumansMagnetic Resonance SpectroscopyModels, MolecularMonoterpenesMutagenesis, InsertionalMycobacterium tuberculosisNADOxidoreductasesProtein BindingProtein ConformationThiazoles2,6-DichloroindophenolcarveolcarvoneCoenzymesCyclohexane MonoterpenesMonoterpenesNADOxidoreductasesThiazolestricyclazole

Identifiers

PMID28120876
PMCPMC5264612
OpenAlexW2582894113

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.