Evidence map›Paper›PMID 28120262›Full record

ArticleFood and environmental virology2017

Re-emergence of a GII.4 Norovirus Sydney 2012 Variant Equipped with GII.P16 RdRp and Its Predominance over Novel Variants of GII.17 in South Korea in 2016.

Yong Seon Choi, Eung Seo Koo, Man Su Kim, Jong Duck Choi, Yongsik Shin, Yong Seok Jeong

Abstract read
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In one paragraph

Article in Food and environmental virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Yong Seon ChoiDepartment of Biology, College of Sciences, Kyung Hee University, Seoul, Republic of Korea.
Eung Seo KooDepartment of Biology, College of Sciences, Kyung Hee University, Seoul, Republic of Korea.
Man Su KimDepartment of Biology, College of Sciences, Kyung Hee University, Seoul, Republic of Korea.
Jong Duck ChoiDepartment of Seafood Science and Technology, Institute of Marine Industry, Gyeongsang National University, Tongyeong, Gyeongnam, South Korea.
Yongsik ShinDepartment of Environmental Engineering & Biotechnology, Mokpo National Maritime University, Mokpo, South Korea.
Yong Seok JeongDepartment of Biology, College of Sciences, Kyung Hee University, Seoul, Republic of Korea. ysjeong@khu.ac.kr.
Kyung Hee University · KRGyeongsang National University · KRMokpo National Maritime University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Noroviruses are major causative pathogen of nonbacterial acute gastroenteritis worldwide. Of the seven genogroups of noroviruses suggested recently, genogroup II genotype 4 (GII.4) had been the most common genotype identified in hospitalized patients in the last few decades. However, since the latter half of 2014, new variants of GII.17 have been reported as the main causes of outbreaks over GII.4 in East Asia and have also occurred in America and Europe. In this study, we monitored norovirus GII in coastal streams at South Gyeongsang province and South Jeolla province of South Korea from March 2015 to May 2016. Norovirus GII.17 capsid sequences were predominantly detected until September 2015 in water samples. However, we found that the number of positive cases of the norovirus GII.4 Sydney 2012 capsid sequence has been increasing since December 2015, overtaking that of GII.17 in 2016. The RdRp genotype of this predominant GII.4 variant in 2016 was identified as GII.P16. The emergence and predominance of the GII.4 pandemic capsid sequence harboring a different RdRp genotype suggested the potential for a future pandemic.

Indexed as

AustraliaCaliciviridae InfectionsDisease OutbreaksGastroenteritisGenotypeHumansNorovirusPhylogenyRepublic of KoreaGII.4GII.P16NorovirusRdRpViral surveillance

Identifiers

PMID28120262
OpenAlexW2581688221

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.