Evidence map›Paper›PMID 28120227›Full record

ArticleThe protein journal2017

High Resolution X-ray Diffraction Dataset for Bacillus licheniformis Gamma Glutamyl Transpeptidase-acivicin complex: SUMO-Tag Renders High Expression and Solubility.

Shobha Kumari, Ravi Kant Pal, Rani Gupta, Manisha Goel

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Article in The protein journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Shobha KumariDepartment of Biophysics, University of Delhi South Campus, Benito Juarez Road, New Delhi, 110021, India.
Ravi Kant PalNational Institute of Immunology (NII), Aruna Asaf Ali Marg, New Delhi, 110067, India.
Rani GuptaDepartment of Microbiology, University of Delhi South Campus, Benito Juarez Road, New Delhi, 110021, India.
Manisha GoelDepartment of Biophysics, University of Delhi South Campus, Benito Juarez Road, New Delhi, 110021, India. manishagoel@south.du.ac.in.
University of Delhi · INNational Institute of Immunology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gamma glutamyl transpeptidase, (GGT) is a ubiquitous protein which plays a central role in glutathione metabolism and has myriad clinical implications. It has been shown to be a virulence factor for pathogenic bacteria, inhibition of which results in reduced colonization potential. However, existing inhibitors are effective but toxic and therefore search is on for novel inhibitors, which makes it imperative to understand the interactions of various inhibitors with the protein in substantial detail. High resolution structures of protein bound to different inhibitors can serve this purpose. Gamma glutamyl transpeptidase from Bacillus licheniformis is one of the model systems that have been used to understand the structure-function correlation of the protein. The structures of the native protein (PDB code 4OTT), of its complex with glutamate (PDB code 4OTU) and that of its precursor mimic (PDB code 4Y23) are available, although at moderate/low resolution. In the present study, we are reporting the preliminary analysis of, high resolution X-ray diffraction data collected for the co-crystals of B. licheniformis, Gamma glutamyl transpeptidase, with its inhibitor, Acivicin. Crystals belong to the orthorhombic space group P2

Indexed as

gamma-GlutamyltransferaseGene ExpressionRecombinant Fusion ProteinsSUMO-1 ProteinBacillus licheniformisIsoxazolesX-Ray Diffractionacivicingamma-GlutamyltransferaseIsoxazolesRecombinant Fusion ProteinsSUMO-1 ProteinAcivicinBacillus licheniformisGamma glutamyl transpeptidaseHigh resolution X-ray diffraction dataInhibitor bindingSUMO-Tag expression system

Identifiers

PMID28120227
OpenAlexW2580529640

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.