Evidence map›Paper›PMID 28120099›Full record

ArticleMolecular genetics and genomics : MGG2017

Molecular cloning and characterization of two novel genes from hexaploid wheat that encode double PR-1 domains coupled with a receptor-like protein kinase.

Shunwen Lu, Justin D Faris, Michael C Edwards

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Article in Molecular genetics and genomics : MGG, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Shunwen LuUSDA-ARS, Cereal Crops Research Unit, Fargo, ND, 58102-2765, USA. Shunwen.Lu@ars.usda.gov.ORCID http://orcid.org/0000-0003-1347-4646
Justin D FarisUSDA-ARS, Cereal Crops Research Unit, Fargo, ND, 58102-2765, USA.
Michael C EdwardsUSDA-ARS, Cereal Crops Research Unit, Fargo, ND, 58102-2765, USA.
Edward T. Schafer Agricultural Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hexaploid wheat (Triticum aestivum L.) contains at least 23 TaPr-1 genes encoding the group 1 pathogenesis-related (PR-1) proteins as identified in our previous work. Here, we report the cloning and characterization of TaPr-1-rk1 and TaPr-1-rk2, two novel genes closely related to the wheat PR-1 family. The two TaPr-1-rk genes are located on homoeologous chromosomes 3D and 3A, respectively, and each contains a large open reading frame (7385 or 6060 bp) that is interrupted by seven introns and subjected to alternative splicing (AS) with five or six isoforms of mRNA transcripts. The deduced full-length TaPR-1-RK1 and TaPR-1-RK2 proteins (95% identity) contain two repeat PR-1 domains, the second of which is fused via a transmembrane helix to a serine/threonine kinase catalytic (STKc) domain characteristic of receptor-like protein kinases. Phylogenetic analysis indicated that the two PR-1 domains of the TaPR-1-RK proteins form sister clades with their homologues identified in other monocot plants and are well separated from stand-alone PR-1 proteins, whereas the STKc domains may have originated from cysteine-rich receptor-like kinases (CRKs). Reverse-transcriptase-PCR analysis revealed that the TaPr-1-rk genes are predominantly expressed in wheat leaves and their expression levels are elevated in response to pathogen attack, such as infection by barley stripe mosaic virus (BSMV), and also to stress conditions, most obviously, to soil salinity. This is the first report of PR-1-CRK hybrid proteins in wheat. The data may shed new insights into the function/evolutionary origin of the PR-1 family and the STKc-mediated defense/stress response pathways in plants.

Indexed as

Genes, PlantAlternative SplicingChromosome MappingCloning, MolecularEvolution, MolecularGene Expression ProfilingGene Expression Regulation, PlantGenomicsIntronsOpen Reading FramesPhylogenyPlant ProteinsPloidiesProtein ConformationProtein DomainsProtein Serine-Threonine KinasesPlant ProteinsProtein Serine-Threonine KinasesCommon wheatCysteine-rich receptor-like kinasePathogenesis-related proteinsPlant defenseSignal transduction pathwaysStress response

Identifiers

PMID28120099
OpenAlexW2580648033

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.