Evidence map›Paper›PMID 28117557›Full record

ArticleThe FEBS journal2017

Asp263 missense variants perturb the active site of human phosphoglucomutase 1.

Kyle M Stiers, Abigail C Graham, Bailee N Kain, Lesa J Beamer

Open access · bronzeAbstract read
In one paragraph

Article in The FEBS journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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  4. HeterozygousFrontiers in genetics · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kyle M StiersBiochemistry Department, University of Missouri, Columbia, MO, USA.
Abigail C GrahamBiochemistry Department, University of Missouri, Columbia, MO, USA.
Bailee N KainBiochemistry Department, University of Missouri, Columbia, MO, USA.
Lesa J BeamerBiochemistry Department, University of Missouri, Columbia, MO, USA.
University of Missouri · US

Funding

MOLECULAR BASIS OF GENE EXPRESSION AND SIGNAL PROCESSINGT32GM008396 · NIGMS · UNIVERSITY OF MISSOURI-COLUMBIA · PI HANNINK, MARK · 1991 to 2021
$4.1M
NIGMS NIH HHS T32 GM008396
6 · The paper itself

Abstract

The enzyme phosphoglucomutase 1 (PGM1) plays a central role in glucose homeostasis. Clinical studies have identified mutations in human PGM1 as the cause of PGM1 deficiency, an inherited metabolic disease. One residue, Asp263, has two known variants associated with disease: D263G and D263Y. Biochemical studies have shown that these mutants are soluble and well folded, but have significant catalytic impairment. To better understand this catalytic defect, we determined crystal structures of these two missense variants, both of which reveal a similar and indirect structural change due to the loss of a conserved salt bridge between Asp263 and Arg293. The arginine reorients into the active site, making interactions with residues responsible for substrate binding. Biochemical studies also show that the catalytic phosphoserine of the missense variants is more stable to hydrolysis relative to wild-type enzyme. The structural perturbation resulting from mutation of this single amino acid reveals the molecular mechanism underlying PGM1 deficiency in these missense variants. DATABASE: Structural data are available in the PDB under the accession numbers 5JN5 and 5TR2.

Indexed as

Protein ConformationArginineAsparagineBinding SitesCatalysisCatalytic DomainCrystallography, X-RayGlucoseGlycogen Storage DiseaseHumansKineticsMutation, MissensePhosphoglucomutaseProtein BindingArginineAsparagineGlucosePGM1 protein, humanPhosphoglucomutaseinherited diseasemissense variantsphosphoglucomutasephosphoryl transferX-ray crystallography

Identifiers

PMID28117557
PMCPMC5802412
OpenAlexW2582684027

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.