Evidence map›Paper›PMID 28117376›Full record

ArticleScientific reports2017

Ligand binding pocket of a novel Allatostatin receptor type C of stick insect, Carausius morosus.

Burcin Duan Sahbaz, Osman Ugur Sezerman, Hamdi Torun, Necla Birgül Iyison

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Burcin Duan SahbazBoğaziçi University Department of Molecular Biology and Genetics, Istanbul, 34342, Turkey.
Osman Ugur SezermanSabancı University Faculty of Engineering and Natural Sciences, Istanbul, 34956, Turkey.
Hamdi TorunBoğaziçi University Department of Electrical and Electronics Engineering, Istanbul, 34342, Turkey.
Necla Birgül IyisonBoğaziçi University Department of Molecular Biology and Genetics, Istanbul, 34342, Turkey.
Boğaziçi University · TRSabancı Üniversitesi · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Allatostatins (AST) are neuropeptides with variable function ranging from regulation of developmental processes to the feeding behavior in insects. They exert their effects by binding to cognate GPCRs, called Allatostatin receptors (AlstR), which emerge as promising targets for pesticide design. However, AlstRs are rarely studied. This study is the first reported structural study on AlstR-AST interaction. In this work, the first C type AlstR from the stick insect Carausius morosus (CamAlstR-C) was identified and its interaction with type C AST peptide was shown to be physically consistent with the experimental results. The proposed structure of CamAlstR-C revealed a conserved motif within the third extracellular loop, which, together with the N-terminus is essential for ligand binding. In this work, computational studies were combined with molecular and nano-scale approaches in order to introduce an unknown GPCR-ligand system. Consequently, the data obtained provided a reliable target region for future agonist/inverse agonist studies on AlstRs.

Indexed as

Amino Acid MotifsAmino Acid SequenceAnimalsBinding SitesInsectaInsect ProteinsLigandsModels, MolecularNeuropeptidesPeptidesPhylogenyProtein BindingProtein Structure, SecondaryReceptors, Cell SurfaceTime FactorsallatostatinInsect ProteinsLigandsNeuropeptidesPeptidesReceptors, Cell Surface

Identifiers

PMID28117376
PMCPMC5259779
OpenAlexW2580423799

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.