Evidence map›Paper›PMID 28116472›Full record

ArticleJournal of molecular evolution2017

The Role of Microsatellites in Streptophyta Gene Evolution.

Abdulqader Jighly, Ayed M Al-Abdallat, Loai M Alnemer

Abstract readLetter
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In one paragraph

Article in Journal of molecular evolution, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 99% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 3 countries.

Abdulqader JighlyAgriculture Victoria, Bioscience Research, AgriBio, Centre for AgriBiosciences, Bundoora, VIC, 3083, Australia. Abdulqader.jighly@ecodev.vic.gov.au.ORCID 0000-0002-2712-3698
Ayed M Al-AbdallatThe International Center for Agricultural Research in the Dry Areas (ICARDA), Cairo, Egypt.
Loai M AlnemerComputer Information Systems Department, The University of Jordan, Amman, Jordan.
University of Jordan · JOInternational Center for Agricultural Research in the Dry Areas · SY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microsatellites form hotspot regions for recombination. In this research, we investigated whether genic microsatellites can be responsible for generating new genes by enhancing crossover between gene containing microsatellites and other genomic regions. We tested our hypothesis on 33,531 UniGene entries containing microsatellites. Each sequence was divided into microsatellites upstream and downstream fragments, and each pair of sequences was compared to study the microsatellites effect. The candidate pairs of genes are supposed to share a high similar fragment in one side of the microsatellites, while the other fragments should be completely different. This in silico approach detected 448 valid pairs of sequences in which both of them showed semi-resemblance nature. The synteny analysis for the detected sequences against 55 plant genomes indicated low representation of them across plant kingdom. Our results will add a body of knowledge toward understanding the role of microsatellites in gene evolution.

Indexed as

Evolution, MolecularExpressed Sequence TagsGenes, PlantGenome, PlantGenomicsMicrosatellite RepeatsStreptophytaSyntenyESTGene evolutionMicrosatellites

Identifiers

PMID28116472
OpenAlexW2582529724

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.