Evidence map›Paper›PMID 28112723›Full record

ArticleNature microbiology2017

Global and regional dissemination and evolution of Burkholderia pseudomallei.

Claire Chewapreecha, Matthew T G Holden, Minna Vehkala, Niko Välimäki, Zhirong Yang, Simon R Harris, Alison E Mather, Apichai Tuanyok, Birgit De Smet, Simon Le Hello and 13 more

Abstract read
In one paragraph

Article in Nature microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 116 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
116citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

116 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Molecular epidemiological analysis ofFrontiers in public health · 2026
    Article
  9. Article
  10. Laboratory diagnosis of melioidosis.PLoS neglected tropical diseases · 2025
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. mSphere · 2024
    Article

56 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Claire ChewapreechaDepartment of Medicine, University of Cambridge, CB2 0QQ, UK.
Matthew T G HoldenWellcome Trust Sanger Institute, Cambridge CB10 1SA, UK.ORCID http://orcid.org/0000-0002-4958-2166
Minna VehkalaDepartment of Mathematics and Statistics, University of Helsinki 00100, Finland.
Niko VälimäkiDepartment of Medical and Clinical Genetics, Genome-Scale Biology Research Program, University of Helsinki 00100, Finland.
Zhirong YangDepartment of Mathematics and Statistics, University of Helsinki 00100, Finland.
Simon R HarrisWellcome Trust Sanger Institute, Cambridge CB10 1SA, UK.ORCID http://orcid.org/0000-0003-1512-6194
Alison E MatherDepartment of Veterinary Medicine, University of Cambridge, CB3 0ES, UK.
Apichai TuanyokEmerging Pathogens Institute, University of Florida, Florida 32611, USA.
Birgit De SmetDepartment of Clinical Sciences, Institute of Tropical Medicine, 2000 Antwerp, Belgium.
Simon Le HelloDepartment of Infection and Epidemiology, Enteric bacteria pathogen Unit, Institut Pasteur, 75015 Paris, France.
Chantal BizetDepartment of Microbiology, Collection of Institut Pasteur, Institut Pasteur, 75015 Paris, France.
Mark MayoGlobal and Tropical Health Division, Menzies School of Health Research, Charles Darwin University and Royal Darwin Hospital, Darwin, Northern Territory 0811 Australia.
Vanaporn WuthiekanunMahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, 10400 Bangkok, Thailand.
Direk LimmathurotsakulMahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, 10400 Bangkok, Thailand.
Rattanaphone PhetsouvanhLao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao PDR.
Brian G SprattDepartment of Infectious Disease Epidemiology, Imperial College, SW7 2AZ, UK.
Jukka CoranderDepartment of Mathematics and Statistics, University of Helsinki 00100, Finland.
Paul KeimCenter for Microbial Genetics and Genomics, Northern Arizona University, Arizona 86011-4073, USA.
Gordon DouganDepartment of Medicine, University of Cambridge, CB2 0QQ, UK.
David A B DanceCentre for Tropical Medicine &Global Health, University of Oxford, OX3 7FZ, UK.ORCID http://orcid.org/0000-0001-9189-7244
Bart J CurrieGlobal and Tropical Health Division, Menzies School of Health Research, Charles Darwin University and Royal Darwin Hospital, Darwin, Northern Territory 0811 Australia.
Julian ParkhillWellcome Trust Sanger Institute, Cambridge CB10 1SA, UK.ORCID http://orcid.org/0000-0002-7069-5958
Sharon J PeacockDepartment of Medicine, University of Cambridge, CB2 0QQ, UK.

Funding

Wellcome Trust
6 · The paper itself

Abstract

The environmental bacterium Burkholderia pseudomallei causes an estimated 165,000 cases of human melioidosis per year worldwide and is also classified as a biothreat agent. We used whole genome sequences of 469 B. pseudomallei isolates from 30 countries collected over 79 years to explore its geographic transmission. Our data point to Australia as an early reservoir, with transmission to Southeast Asia followed by onward transmission to South Asia and East Asia. Repeated reintroductions were observed within the Malay Peninsula and between countries bordered by the Mekong River. Our data support an African origin of the Central and South American isolates with introduction of B. pseudomallei into the Americas between 1650 and 1850, providing a temporal link with the slave trade. We also identified geographically distinct genes/variants in Australasian or Southeast Asian isolates alone, with virulence-associated genes being among those over-represented. This provides a potential explanation for clinical manifestations of melioidosis that are geographically restricted.

Indexed as

Evolution, MolecularAmericasAnimalsAsiaAsia, EasternAsia, SoutheasternAustraliaBurkholderia pseudomalleiDNA, BacterialHumansMalaysiaMelioidosisSequence Analysis, DNAVirulenceDNA, Bacterial

Identifiers

PMID28112723
PMCPMC5300093

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.