Evidence map›Paper›PMID 28112165›Full record

ArticleScientific reports2017

Loss of Merlin induces metabolomic adaptation that engages dependence on Hedgehog signaling.

Shamik Das, William P Jackson, Jeevan K Prasain, Ann Hanna, Sarah K Bailey, J Allan Tucker, Sejong Bae, Landon S Wilson, Rajeev S Samant, Stephen Barnes and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. NRF2 and Primary Cilia: An Emerging Partnership.Antioxidants (Basel, Switzerland) · 2020
    Review
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Shamik DasDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL 35233, USA.
William P JacksonDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL 35233, USA.
Jeevan K PrasainDepartment of Pharmacology and Toxicology, University of Alabama at Birmingham, Birmingham, AL 35233, USA.
Ann HannaDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL 35233, USA.
Sarah K BaileyDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL 35233, USA.
J Allan TuckerUniversity of South Alabama, AL 36617, United States.
Sejong BaeComprehensive Cancer Center, University of Alabama at Birmingham, Birmingham, AL 35233, USA.
Landon S WilsonTargeted Metabolomics and Proteomics Laboratory, University of Alabama at Birmingham, Birmingham, AL 35233, USA.
Rajeev S SamantDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL 35233, USA.
Stephen BarnesDepartment of Pharmacology and Toxicology, University of Alabama at Birmingham, Birmingham, AL 35233, USA.
Lalita A ShevdeDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL 35233, USA.
University of Alabama at Birmingham · USTarget (United States) · USUniversity of South Alabama · US

Funding

XRAY CRYSTALLOGRAPHYP30CA013148 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Robert S Welner · 1985 to 2026
$165.9M
University of Alabama at Birmingham's Diabetes Research CenterP30DK079626 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Kirk Michael Habegger · 2013 to 2026
$19.5M
Molecular determinants of breast cancer malignancyR01CA138850 · NCI · UNIVERSITY OF SOUTH ALABAMA · PI SHEVDE, LALITA A. · 2011 to 2015
$1.6M
Mechanisms of resistance to cancer therapeuticsR01CA169202 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI SHEVDE, LALITA A. · 2014 to 2018
$1.5M
5500 Q-Trap Mass SpectrometerS10RR027822 · NCRR · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI BARNES, STEPHEN · 2010 to 2010
$469k
NCI NIH HHS P30 CA013148NCI NIH HHS R01 CA138850NCI NIH HHS R01 CA169202NCRR NIH HHS S10 RR027822NIDDK NIH HHS P30 DK079626
6 · The paper itself

Abstract

The tumor suppressor protein Merlin is proteasomally degraded in breast cancer. We undertook an untargeted metabolomics approach to discern the global metabolomics profile impacted by Merlin in breast cancer cells. We discerned specific changes in glutathione metabolites that uncovered novel facets of Merlin in impacting the cancer cell metabolome. Concordantly, Merlin loss increased oxidative stress causing aberrant activation of Hedgehog signaling. Abrogation of GLI-mediated transcription activity compromised the aggressive phenotype of Merlin-deficient cells indicating a clear dependence of cells on Hedgehog signaling. In breast tumor tissues, GLI1 expression enhanced tissue identification and discriminatory power of Merlin, cumulatively presenting a powerful substantiation of the relationship between these two proteins. We have uncovered, for the first time, details of the tumor cell metabolomic portrait modulated by Merlin, leading to activation of Hedgehog signaling. Importantly, inhibition of Hedgehog signaling offers an avenue to target the vulnerability of tumor cells with loss of Merlin.

Indexed as

Adaptation, PhysiologicalHedgehog ProteinsHumansMCF-7 CellsMetabolomeNeurofibromin 2Oxidative StressSignal TransductionZinc Finger Protein GLI1GLI1 protein, humanHedgehog ProteinsNeurofibromin 2Zinc Finger Protein GLI1

Identifiers

PMID28112165
PMCPMC5256100
OpenAlexW2583072305

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.