Evidence map›Paper›PMID 28111547›Full record

ArticleFrontiers in neuroinformatics2016

Cyberinfrastructure for Open Science at the Montreal Neurological Institute.

Samir Das, Tristan Glatard, Christine Rogers, John Saigle, Santiago Paiva, Leigh MacIntyre, Mouna Safi-Harab, Marc-Etienne Rousseau, Jordan Stirling, Najmeh Khalili-Mahani and 24 more

Abstract read
In one paragraph

Article in Frontiers in neuroinformatics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Predicting age from cortical structure across the lifespan.The European journal of neuroscience · 2018
    Article
  13. Integration ofFrontiers in neuroinformatics · 2018
    Article
  14. Article
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors.

Samir DasMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada.
Tristan GlatardDepartment of Computer Science and Software Engineering, Concordia University Montreal, QC, Canada.
Christine RogersMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada.
John SaigleMontreal Neurological Institute Montreal, QC, Canada.
Santiago PaivaMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; McConnell Brain Imaging Centre, Montreal Neurological InstituteMontreal, QC, Canada.
Leigh MacIntyreMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada.
Mouna Safi-HarabMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada.
Marc-Etienne RousseauMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada.
Jordan StirlingMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada.
Najmeh Khalili-MahaniMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada; Department of Computer Science and Software Engineering, Concordia UniversityMontreal, QC, Canada.
David MacFarlaneMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada.
Penelope KostopoulosMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada.
Pierre RiouxMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada.
Cecile MadjarDouglas Mental Health University Hospital Montreal, QC, Canada.
Xavier Lecours-BoucherMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada.
Sandeep VanamalaMontreal Neurological Institute Montreal, QC, Canada.
Reza AdalatMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada.
Zia MohaddesMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada.
Vladimir S FonovMontreal Neurological InstituteMontreal, QC, Canada; McConnell Brain Imaging Centre, Montreal Neurological InstituteMontreal, QC, Canada.
Sylvain MilotMontreal Neurological InstituteMontreal, QC, Canada; McConnell Brain Imaging Centre, Montreal Neurological InstituteMontreal, QC, Canada.
Ilana LeppertMontreal Neurological InstituteMontreal, QC, Canada; McConnell Brain Imaging Centre, Montreal Neurological InstituteMontreal, QC, Canada.
Clotilde DegrootMontreal Neurological Institute Montreal, QC, Canada.
Thomas M DurcanMontreal Neurological Institute Montreal, QC, Canada.
Tara CampbellMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada.
Jeremy MoreauMontreal Neurological InstituteMontreal, QC, Canada; McConnell Brain Imaging Centre, Montreal Neurological InstituteMontreal, QC, Canada.
Alain DagherMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; McConnell Brain Imaging Centre, Montreal Neurological InstituteMontreal, QC, Canada.
D Louis CollinsMontreal Neurological InstituteMontreal, QC, Canada; McConnell Brain Imaging Centre, Montreal Neurological InstituteMontreal, QC, Canada.
Jason KaramchandaniMontreal Neurological Institute Montreal, QC, Canada.
Amit Bar-OrMontreal Neurological Institute Montreal, QC, Canada.
Edward A FonMontreal Neurological Institute Montreal, QC, Canada.
Rick HogeMontreal Neurological InstituteMontreal, QC, Canada; McConnell Brain Imaging Centre, Montreal Neurological InstituteMontreal, QC, Canada.
Sylvain BailletMontreal Neurological InstituteMontreal, QC, Canada; McConnell Brain Imaging Centre, Montreal Neurological InstituteMontreal, QC, Canada.
Guy RouleauMontreal Neurological Institute Montreal, QC, Canada.
Alan C EvansMcGill Centre for Integrative Neuroscience, Montreal Neurological InstituteMontreal, QC, Canada; Montreal Neurological InstituteMontreal, QC, Canada.

Funding

Tools for Large-Scale Platform-Independent MEG Data AnalysisR01EB009048 · NIBIB · MASSACHUSETTS GENERAL HOSPITAL · PI HAMALAINEN, MATTI, LEAHY, RICHARD M · 2009 to 2016
$4.6M
NIBIB NIH HHS R01 EB009048
6 · The paper itself

Abstract

Data sharing is becoming more of a requirement as technologies mature and as global research and communications diversify. As a result, researchers are looking for practical solutions, not only to enhance scientific collaborations, but also to acquire larger amounts of data, and to access specialized datasets. In many cases, the realities of data acquisition present a significant burden, therefore gaining access to public datasets allows for more robust analyses and broadly enriched data exploration. To answer this demand, the Montreal Neurological Institute has announced its commitment to Open Science, harnessing the power of making both clinical and research data available to the world (Owens, 2016a,b). As such, the LORIS and CBRAIN (Das et al., 2016) platforms have been tasked with the technical challenges specific to the institutional-level implementation of open data sharing, including: Comprehensive linking of multimodal data (phenotypic, clinical, neuroimaging, biobanking, and genomics, etc.)Secure database encryption, specifically designed for institutional and multi-project data sharing, ensuring subject confidentiality (using multi-tiered identifiers).Querying capabilities with multiple levels of single study and institutional permissions, allowing public data sharing for all consented and de-identified subject data.Configurable pipelines and flags to facilitate acquisition and analysis, as well as access to High Performance Computing clusters for rapid data processing and sharing of software tools.Robust Workflows and Quality Control mechanisms ensuring transparency and consistency in best practices.Long term storage (and web access) of data, reducing loss of institutional data assets.Enhanced web-based visualization of imaging, genomic, and phenotypic data, allowing for real-time viewing and manipulation of data from anywhere in the world.Numerous modules for data filtering, summary statistics, and personalized and configurable dashboards. Implementing the vision of Open Science at the Montreal Neurological Institute will be a concerted undertaking that seeks to facilitate data sharing for the global research community. Our goal is to utilize the years of experience in multi-site collaborative research infrastructure to implement the technical requirements to achieve this level of public data sharing in a practical yet robust manner, in support of accelerating scientific discovery.

Indexed as

bidsbig datacyberinfrastructuredata sharingneuroimagingneuroscienceopen science frameworkworkflow

Identifiers

PMID28111547
PMCPMC5216036

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.