Evidence map›Paper›PMID 28111253›Full record

ArticleComparative biochemistry and physiology. Toxicology & pharmacology : CBP2017

Atrazine exposure elicits copy number alterations in the zebrafish genome.

Sara E Wirbisky, Jennifer L Freeman

Open access · greenAbstract read
In one paragraph

Article in Comparative biochemistry and physiology. Toxicology & pharmacology : CBP, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Sara E WirbiskySchool of Health Sciences, Purdue University, West Lafayette, IN, 47909, United States. Electronic address: swirbisk@purdue.edu.
Jennifer L FreemanSchool of Health Sciences, Purdue University, West Lafayette, IN, 47909, United States. Electronic address: jfreema@purdue.edu.
Purdue University West Lafayette · US

Funding

Molecular biomarkers of exposure to an endocrine disrupting herbicideR15ES019137 · NIEHS · PURDUE UNIVERSITY · PI FREEMAN, JENNIFER L. · 2010 to 2013
$891k
NIEHS NIH HHS R15 ES019137
6 · The paper itself

Abstract

Atrazine is an agricultural herbicide used throughout the Midwestern United States that frequently contaminates potable water supplies resulting in human exposure. Using the zebrafish model system, an embryonic atrazine exposure was previously reported to decrease spawning rates with an increase in progesterone and ovarian follicular atresia in adult females. In addition, alterations in genes associated with distinct molecular pathways of the endocrine system were observed in brain and gonad tissue of the adult females and males. Current hypotheses for mechanistic changes in the developmental origins of health and disease include genetic (e.g., copy number alterations) or epigenetic (e.g., DNA methylation) mechanisms. As such, in the current study we investigated whether an atrazine exposure would generate copy number alterations (CNAs) in the zebrafish genome. A zebrafish fibroblast cell line was used to limit detection to CNAs caused by the chemical exposure. First, cells were exposed to a range of atrazine concentrations and a crystal violet assay was completed, showing confluency decreased by ~60% at 46.3μM. Cells were then exposed to 0, 0.463, 4.63, or 46.3μM atrazine and array comparative genomic hybridization completed. Results showed 34, 21, and 44 CNAs in the 0.463, 4.63, and 46.3μM treatments, respectively. Furthermore, CNAs were associated with previously reported gene expression alterations in adult male and female zebrafish. This study demonstrates that atrazine exposure can generate CNAs that are linked to gene expression alterations observed in adult zebrafish exposed to atrazine during embryogenesis providing a mechanism of the developmental origins of atrazine endocrine disruption.

Indexed as

AnimalsAtrazineBrainCell LineComparative Genomic HybridizationEmbryonic DevelopmentEndocrine DisruptorsFemaleGene DosageGene Expression RegulationGene Expression Regulation, DevelopmentalGenomeHerbicidesMaleMutagensOsmolar ConcentrationAtrazineEndocrine DisruptorsHerbicidesMutagensRNA, MessengerWater Pollutants, ChemicalArray comparative genomic hybridizationAtrazineCopy number alterationsTranscriptomicsZebrafish

Identifiers

PMID28111253
PMCPMC5325771
OpenAlexW2578837276

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.