Evidence map›Paper›PMID 28109880›Full record

ArticleBiochemical and biophysical research communications2017

Dynamics of the EAG1 K

Harald Bernsteiner, Michael Bründl, Anna Stary-Weinzinger

Open access · hybridAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Selectivity filter modalities and rapid inactivation of the hERG1 channel.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Harald BernsteinerDepartment of Pharmacology and Toxicology, University of Vienna, Althanstraße 14, 1090 Vienna, Austria.
Michael BründlDepartment of Pharmacology and Toxicology, University of Vienna, Althanstraße 14, 1090 Vienna, Austria.
Anna Stary-WeinzingerDepartment of Pharmacology and Toxicology, University of Vienna, Althanstraße 14, 1090 Vienna, Austria. Electronic address: anna.stary@univie.ac.at.
University of Vienna · AT

Funding

Austrian Science Fund FWF W 1232
6 · The paper itself

Abstract

EAG1 channels belong to the KCNH family of voltage gated potassium channels. They are expressed in several brain regions and increased expression is linked to certain cancer types. Recent cryo-EM structure determination finally revealed the structure of these channels in atomic detail, allowing computational investigations. In this study, we performed molecular dynamics simulations to investigate the ion binding sites and the dynamical behavior of the selectivity filter. Our simulations suggest that sites S2 and S4 form stable ion binding sites, while ions placed at sites S1 and S3 rapidly switched to sites S2 and S4. Further, ions tended to dissociate away from S0 within less than 20 ns, due to increased filter flexibility. This was followed by water influx from the extracellular side, leading to a widening of the filter in this region, and likely non-conductive filter configurations. Simulations with the inactivation-enhancing mutant Y464A or Na

Indexed as

Cryoelectron MicroscopyEther-A-Go-Go Potassium ChannelsHumansMolecular Dynamics SimulationEther-A-Go-Go Potassium ChannelsKCNH1 protein, humanC-type inactivationIon binding sitesKCNH1 channelMolecular dynamics simulationNa(+) binding sitesY464A mutant

Identifiers

PMID28109880
PMCPMC6531291
OpenAlexW2576043251

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.