Evidence map›Paper›PMID 28109157›Full record

ArticleeLife2017

Concerted regulation of ISWI by an autoinhibitory domain and the H4 N-terminal tail.

Johanna Ludwigsen, Sabrina Pfennig, Ashish K Singh, Christina Schindler, Nadine Harrer, Ignasi Forné, Martin Zacharias, Felix Mueller-Planitz

Abstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. How does CHD4 slide nucleosomes?Biochemical Society transactions · 2024
    Review
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  3. Review
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  10. Structure and Function of Chromatin Remodelers.Journal of molecular biology · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Johanna LudwigsenBiomedical Center, Ludwig-Maximilians-Universität München, Munich, Germany.
Sabrina PfennigBiomedical Center, Ludwig-Maximilians-Universität München, Munich, Germany.
Ashish K SinghBiomedical Center, Ludwig-Maximilians-Universität München, Munich, Germany.
Christina SchindlerPhysics Department (T38), Technische Universität München, Munich, Germany.
Nadine HarrerBiomedical Center, Ludwig-Maximilians-Universität München, Munich, Germany.
Ignasi FornéBiomedical Center, Ludwig-Maximilians-Universität München, Munich, Germany.
Martin ZachariasPhysics Department (T38), Technische Universität München, Munich, Germany.
Felix Mueller-PlanitzBiomedical Center, Ludwig-Maximilians-Universität München, Munich, Germany.ORCID 0000-0001-8273-6473

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ISWI-family nucleosome remodeling enzymes need the histone H4 N-terminal tail to mobilize nucleosomes. Here we mapped the H4-tail binding pocket of ISWI. Surprisingly the binding site was adjacent to but not overlapping with the docking site of an auto-regulatory motif, AutoN, in the N-terminal region (NTR) of ISWI, indicating that AutoN does not act as a simple pseudosubstrate as suggested previously. Rather, AutoN cooperated with a hitherto uncharacterized motif, termed AcidicN, to confer H4-tail sensitivity and discriminate between DNA and nucleosomes. A third motif in the NTR, ppHSA, was functionally required in vivo and provided structural stability by clamping the NTR to Lobe 2 of the ATPase domain. This configuration is reminiscent of Chd1 even though Chd1 contains an unrelated NTR. Our results shed light on the intricate structural and functional regulation of ISWI by the NTR and uncover surprising parallels with Chd1.

Indexed as

Gene Expression RegulationAdenosine TriphosphatasesAmino Acid MotifsAnimalsDrosophilaHistonesProtein BindingProtein Interaction MappingSaccharomyces cerevisiaeTranscription FactorsAdenosine TriphosphatasesHistonesISWI proteinTranscription FactorsATPasebiochemistrychromatin remodelingchromosomesgenesnucleosomeS. cerevisiaeSnf2

Identifiers

PMID28109157
PMCPMC5305211

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.