Evidence map›Paper›PMID 28107343›Full record

ArticlePLoS genetics2017

Mutations in the Non-Catalytic Subunit Dpb2 of DNA Polymerase Epsilon Affect the Nrm1 Branch of the DNA Replication Checkpoint.

Michał Dmowski, Justyna Rudzka, Judith L Campbell, Piotr Jonczyk, Iwona J Fijałkowska

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Michał DmowskiInstitute of Biochemistry and Biophysics, Polish Academy of Sciences Pawińskiego 5a, Warsaw, POLAND.ORCID 0000-0002-6571-6259
Justyna RudzkaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences Pawińskiego 5a, Warsaw, POLAND.
Judith L CampbellBraun Laboratories, California Institute of Technology, Pasadena, CA, United States of America.
Piotr JonczykInstitute of Biochemistry and Biophysics, Polish Academy of Sciences Pawińskiego 5a, Warsaw, POLAND.
Iwona J FijałkowskaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences Pawińskiego 5a, Warsaw, POLAND.
Institute of Biochemistry and Biophysics, Polish Academy of Sciences · PLCalifornia Institute of Technology · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To preserve genome integrity, the S-phase checkpoint senses damaged DNA or nucleotide depletion and when necessary, arrests replication progression and delays cell division. Previous studies, based on two pol2 mutants have suggested the involvement of DNA polymerase epsilon (Pol ε) in sensing DNA replication accuracy in Saccharomyces cerevisiae. Here we have studied the involvement of Pol ε in sensing proper progression of DNA replication, using a mutant in DPB2, the gene coding for a non-catalytic subunit of Pol ε. Under genotoxic conditions, the dpb2-103 cells progress through S phase faster than wild-type cells. Moreover, the Nrm1-dependent branch of the checkpoint, which regulates the expression of many replication checkpoint genes, is impaired in dpb2-103 cells. Finally, deletion of DDC1 in the dpb2-103 mutant is lethal supporting a model of strand-specific activation of the replication checkpoint. This lethality is suppressed by NRM1 deletion. We postulate that improper activation of the Nrm1-branch may explain inefficient replication checkpoint activation in Pol ε mutants.

Indexed as

DNA Polymerase IIMutationRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsS PhaseDNA Polymerase IIDpb2 protein, S cerevisiaeNrm1 protein, S cerevisiaeRepressor ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID28107343
PMCPMC5291541
OpenAlexW2579209942

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.