Evidence map›Paper›PMID 28106768›Full record

ArticleInternational journal of molecular sciences2017

Lipid and Glycolipid Isomer Analyses Using Ultra-High Resolution Ion Mobility Spectrometry Separations.

Roza Wojcik, Ian K Webb, Liulin Deng, Sandilya V B Garimella, Spencer A Prost, Yehia M Ibrahim, Erin S Baker, Richard D Smith

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Roza WojcikBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, USA. roza.wojcik@pnnl.gov.
Ian K WebbBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, USA. ian.webb@pnnl.gov.
Liulin DengBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, USA. liulin.deng@pnnl.gov.
Sandilya V B GarimellaBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, USA. sandilya.garimella@pnnl.gov.
Spencer A ProstEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA 99352, USA. spencer.prost@pnnl.gov.
Yehia M IbrahimBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, USA. yehia.ibrahim@pnnl.gov.
Erin S BakerBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, USA. erin.baker@pnnl.gov.
Richard D SmithBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, USA. rds@pnnl.gov.

Funding

Systems Biology Identifies Restriction Factors for West Nile VirusU19AI106772 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI WATERS, KATRINA M. · 2013 to 2017
$26.1M
Equipment Supplement Request for a Research Resource for Ultra-sensitive High Throughput ProteomicsP41GM103493 · NIGMS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI SMITH, RICHARD D · 2012 to 2022
$22.6M
Platform Providing Increased Throughput, Sensitivity and Specificity for MetaboloR01ES022190 · NIEHS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI BAKER, ERIN S · 2012 to 2016
$2.2M
NIAID NIH HHS U19 AI106772NIEHS NIH HHS R01 ES022190NIGMS NIH HHS P41 GM103493
6 · The paper itself

Abstract

Understanding the biological roles and mechanisms of lipids and glycolipids is challenging due to the vast number of possible isomers that may exist. Mass spectrometry (MS) measurements are currently the dominant approach for studying and providing detailed information on lipid and glycolipid presence and changes. However, difficulties in distinguishing the many structural isomers, due to the distinct lipid acyl chain positions, double bond locations or specific glycan types, inhibit the delineation and assignment of their biological roles. Here we utilized ultra-high resolution ion mobility spectrometry (IMS) separations by applying traveling waves in a serpentine multi-pass Structures for Lossless Ion Manipulations (SLIM) platform to enhance the separation of selected lipid and glycolipid isomers. The multi-pass arrangement allowed the investigation of paths ranging from ~16 m (one pass) to ~60 m (four passes) for the distinction of lipids and glycolipids with extremely small structural differences. These ultra-high resolution SLIM IMS-MS analyses provide a foundation for exploring and better understanding isomer-specific biological activities and disease processes.

Indexed as

GlycolipidsIsomerismMass SpectrometryGlycolipidsglycolipidsion mobility spectrometryisomerslipids

Identifiers

PMID28106768
PMCPMC5297815

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.