Evidence map›Paper›PMID 28106078›Full record

ArticleScientific reports2017

Comparative Phosphoproteomics Reveals an Important Role of MKK2 in Banana (Musa spp.) Cold Signal Network.

Jie Gao, Sheng Zhang, Wei-Di He, Xiu-Hong Shao, Chun-Yu Li, Yue-Rong Wei, Gui-Ming Deng, Rui-Bin Kuang, Chun-Hua Hu, Gan-Jun Yi and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
6.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 40 citations in OpenAlex.

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  7. Genome-Wide Identification of thePlants (Basel, Switzerland) · 2023
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  9. TheInternational journal of molecular sciences · 2022
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  10. Review
  11. A Phosphoproteomics Study of the SoybeanFrontiers in plant science · 2022
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  15. Article
  16. Article
  17. Large-Scale Phosphoproteomic Study ofInternational journal of molecular sciences · 2020
    Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Jie GaoState Key Laboratory for Conservation and Utilization of Subtropical Agro- bioresources, South China Agricultural University, Guangzhou, 510640, China.
Sheng ZhangInstitute of Biotechnology, Cornell University, Ithaca, NY, USA.
Wei-Di HeInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, China.
Xiu-Hong ShaoInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, China.
Chun-Yu LiInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, China.
Yue-Rong WeiInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, China.
Gui-Ming DengInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, China.
Rui-Bin KuangInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, China.
Chun-Hua HuInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, China.
Gan-Jun YiInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, China.
Qiao-Song YangInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, China.
Guangdong Academy of Agricultural Sciences · CNGuangzhou Experimental Station · CNCornell University · US

Funding

Acquisition of a Hybrid Quadrupole, Ion Mobility Separation, Orthogonal AcceleratS10RR025449 · NCRR · CORNELL UNIVERSITY · PI ZHANG, SHENG · 2009 to 2009
$500k
NCRR NIH HHS S10 RR025449
6 · The paper itself

Abstract

Low temperature is one of the key environmental stresses, which greatly affects global banana production. However, little is known about the global phosphoproteomes in Musa spp. and their regulatory roles in response to cold stress. In this study, we conducted a comparative phosphoproteomic profiling of cold-sensitive Cavendish Banana and relatively cold tolerant Dajiao under cold stress. Phosphopeptide abundances of five phosphoproteins involved in MKK2 interaction network, including MKK2, HY5, CaSR, STN7 and kinesin-like protein, show a remarkable difference between Cavendish Banana and Dajiao in response to cold stress. Western blotting of MKK2 protein and its T31 phosphorylated peptide verified the phosphoproteomic results of increased T31 phosphopeptide abundance with decreased MKK2 abundance in Daojiao for a time course of cold stress. Meanwhile increased expression of MKK2 with no detectable T31 phosphorylation was found in Cavendish Banana. These results suggest that the MKK2 pathway in Dajiao, along with other cold-specific phosphoproteins, appears to be associated with the molecular mechanisms of high tolerance to cold stress in Dajiao. The results also provide new evidence that the signaling pathway of cellular MKK2 phosphorylation plays an important role in abiotic stress tolerance that likely serves as a universal plant cold tolerance mechanism.

Indexed as

Cold TemperatureProteomeProteomicsAdaptation, BiologicalAmino Acid MotifsAmino Acid SequenceMitogen-Activated Protein Kinase KinasesMusaPhenotypePhosphopeptidesPhosphoproteinsPhosphorylationPlant ProteinsProtein Interaction MappingProtein Interaction MapsStress, PhysiologicalMitogen-Activated Protein Kinase KinasesPhosphopeptidesPhosphoproteinsPlant ProteinsProteome

Identifiers

PMID28106078
PMCPMC5247763
OpenAlexW2573900455

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.