Evidence map›Paper›PMID 28102861›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2017

Clinical utility of next-generation sequencing for inherited bone marrow failure syndromes.

Hideki Muramatsu, Yusuke Okuno, Kenichi Yoshida, Yuichi Shiraishi, Sayoko Doisaki, Atsushi Narita, Hirotoshi Sakaguchi, Nozomu Kawashima, Xinan Wang, Yinyan Xu and 21 more

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Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

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  8. When to consider inherited marrow failure syndromes in adults.Hematology. American Society of Hematology. Education Program · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors.

Hideki MuramatsuDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan.ORCID 0000-0002-8801-0021
Yusuke OkunoDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Kenichi YoshidaDepartment of Pathology and Tumor Biology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Yuichi ShiraishiLaboratory of DNA Information Analysis, Human Genome Center, Institute of Medical Science, The University of Tokyo, Tokyo, Japan.
Sayoko DoisakiDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Atsushi NaritaDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Hirotoshi SakaguchiDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Nozomu KawashimaDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan.ORCID 0000-0001-5700-4481
Xinan WangDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan.ORCID 0000-0003-0024-0402
Yinyan XuDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Kenichi ChibaLaboratory of DNA Information Analysis, Human Genome Center, Institute of Medical Science, The University of Tokyo, Tokyo, Japan.
Hiroko TanakaLaboratory of DNA Information Analysis, Human Genome Center, Institute of Medical Science, The University of Tokyo, Tokyo, Japan.ORCID 0000-0001-9634-8922
Asahito HamaDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Masashi SanadaDepartment of Pathology and Tumor Biology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.ORCID 0000-0003-0666-1996
Yoshiyuki TakahashiDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Hitoshi KannoDepartment of Transfusion Medicine and Cell Processing, Tokyo Women's Medical University, Tokyo, Japan.ORCID 0000-0002-0893-4030
Hiroki YamaguchiDepartment of Hematology, Nippon Medical School, Tokyo, Japan.
Shouichi OhgaDepartment of Pediatrics, Yamaguchi University Graduate School of Medicine, Ube, Japan.
Atsushi ManabeDepartment of Pediatrics, St. Luke's International Hospital, Tokyo, Japan.ORCID 0000-0002-6698-2348
Hideo HarigaeDepartment of Hematology and Rheumatology, Tohoku University Graduate School, Sendai, Japan.
Shinji KunishimaDepartment of Advanced Diagnosis, Clinical Research Center, National Hospital Organization Nagoya Medical Center, Nagoya, Japan.
Eiichi IshiiDepartment of Pediatrics, Ehime University Graduate School of Medicine, Ehime, Japan.ORCID 0000-0002-1561-2144
Masao KobayashiDepartment of Pediatrics, Hiroshima University Hospital, Hiroshima, Japan.
Kenichi KoikeDepartment of Pediatrics, Shinshu University School of Medicine, Matsumoto, Japan.
Kenichiro WatanabeDepartment of Hematology/Oncology, Shizuoka Children's Hospital, Shizuoka, Japan.
Etsuro ItoDepartment of Pediatrics, Hirosaki University Graduate School of Medicine, Hirosaki, Japan.ORCID 0000-0002-0168-2475
Minoru TakataLaboratory of DNA Damage Signaling, Department of Late Effects Studies, Radiation Biology Center, Kyoto University, Kyoto, Japan.ORCID 0000-0002-4926-3675
Miharu YabeDepartment of Cell Transplantation and Regenerative Medicine, Tokai University Hospital, Isehara, Japan.ORCID 0000-0003-0697-5506
Seishi OgawaDepartment of Pathology and Tumor Biology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Satoru MiyanoLaboratory of DNA Information Analysis, Human Genome Center, Institute of Medical Science, The University of Tokyo, Tokyo, Japan.ORCID 0000-0002-1753-6616
Seiji KojimaDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposePrecise genetic diagnosis of inherited bone marrow failure syndromes (IBMFS), a heterogeneous group of genetic disorders, is challenging but essential for precise clinical decision making.

methodsWe analyzed 121 IBMFS patients using a targeted sequencing covering 184 associated genes and 250 IBMFS patients using whole-exome sequencing (WES).

resultsWe achieved successful genetic diagnoses for 53 of 121 patients (44%) using targeted sequencing and for 68 of 250 patients (27%) using WES. In the majority of cases (targeted sequencing: 45/53, 85%; WES: 63/68, 93%), the detected variants were concordant with, and therefore supported, the clinical diagnoses. However, in the remaining 13 cases (8 patients by target sequencing and 5 patients by WES), the clinical diagnoses were incompatible with the detected variants.

conclusionOur approach utilizing targeted sequencing and WES achieved satisfactory diagnostic rates and supported the efficacy of massive parallel sequencing as a diagnostic tool for IBMFS.Genet Med advance online publication 19 January 2017.

Indexed as

Anemia, AplasticBone Marrow DiseasesBone Marrow Failure DisordersExomeExome SequencingFemaleGenetic TestingHemoglobinuria, ParoxysmalHigh-Throughput Nucleotide SequencingHumansMaleMutationSequence Analysis, DNA

Identifiers

PMID28102861

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