Evidence map›Paper›PMID 28100914›Full record

ArticleInternational journal of obesity (2005)2017

TET-mediated hydroxymethylcytosine at the Pparγ locus is required for initiation of adipogenic differentiation.

Y Yoo, J H Park, C Weigel, D B Liesenfeld, D Weichenhan, C Plass, D-G Seo, A M Lindroth, Y J Park

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Article in International journal of obesity (2005), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 57 citations in OpenAlex.

  1. Review
  2. Cell identity and 5-hydroxymethylcytosine.Epigenetics & chromatin · 2025
    Review
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  20. The Beige Adipocyte as a Therapy for Metabolic Diseases.International journal of molecular sciences · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Y YooDepartment of Nutritional Science and Food Management, Ewha Womans University, Seoul, Republic of Korea.ORCID 0000-0001-6999-4996
J H ParkDepartment of Nutritional Science and Food Management, Ewha Womans University, Seoul, Republic of Korea.
C WeigelDivision of Epigenomics and Cancer Risk Factors, German Cancer Research Center, Heidelberg, Germany.
D B LiesenfeldDivision of Preventive Oncology, German Cancer Research Center, Heidelberg, Germany.
D WeichenhanDivision of Epigenomics and Cancer Risk Factors, German Cancer Research Center, Heidelberg, Germany.
C PlassDivision of Epigenomics and Cancer Risk Factors, German Cancer Research Center, Heidelberg, Germany.
D-G SeoDepartment of Conservative Dentistry, Seoul National University, Seoul, Korea.
A M LindrothDepartment of System Cancer Science, Graduate School of Cancer Science and Policy, National Cancer Center, Goyang, Republic of Korea.
Y J ParkDepartment of Nutritional Science and Food Management, Ewha Womans University, Seoul, Republic of Korea.
German Cancer Research Center · DEEwha Womans University · KRNational Cancer Center · KRSeoul National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND/

objectivesAdipose tissue is one of the main organs regulating energy homeostasis via energy storage as well as endocrine function. The adipocyte cell number is largely determined by adipogenesis. While the molecular mechanism of adipogenesis has been extensively studied, its role in dynamic DNA methylation plasticity remains unclear. Recently, it has been shown that Tet methylcytosine dioxygenase (TET) is catalytically capable of oxidizing DNA 5-methylcytosine (5-mC) to 5-hydroxymethylcytosine (5-hmC) toward a complete removal of the methylated cytosine. We investigate whether expression of the Tet genes and production of hydroxymethylcytosine are required for preadipocyte differentiation. SUBJECTS/

methodsMurine 3T3-L1 preadipocytes were used to evaluate the role of Tet1 and Tet2 genes during adipogenesis. Changes in adipogenic ability and in epigenetic status were analyzed, with and without interfering Tet1 and Tet2 expression using small interfering RNA (siRNA). The adipogenesis was evaluated by Oil-Red-O staining and induced expression of adipogenic genes using quantitative polymerase chain reaction (qPCR). Levels of 5-hmC and 5-mC were measured by MassARRAY, immunoprecipitation and GC mass spectrometry at specific loci as well as globally.

resultsBoth Tet1 and Tet2 genes were upregulated in a time-dependent manner, accompanied by increased expression of hallmark adipogenic genes such as Pparγ and Fabp4 (P<0.05). The TET upregulation led to reduced DNA methylation and elevated hydroxymethylcytosine, both globally and specifically at the Pparγ locus (P<0.05 and P<0.01, respectively). Knockdown of Tet1 and Tet2 blocked adipogenesis (P<0.01) by repression of Pparγ expression (P<0.05). In particular, Tet2 knockdown repressed conversion of 5-mC to 5-hmC at the Pparγ locus (P<0.01). Moreover, vitamin C treatment enhanced adipogenesis (P<0.05), while fumarate treatment inhibited it (P<0.01) by modulating TET activities.

conclusionsTET proteins, particularly TET2, were required for adipogenesis by modulating DNA methylation at the Pparγ locus, subsequently by inducing Pparγ gene expression.

Indexed as

3T3-L1 Cells5-MethylcytosineAdipocytesAdipogenesisAnimalsCell DifferentiationCells, CulturedDioxygenasesDNA-Binding ProteinsDNA MethylationGene ExpressionGene Knockdown TechniquesMiceMice, Inbred C57BLPPAR gammaProto-Oncogene Proteins5-hydroxymethylcytosine5-MethylcytosineDioxygenasesDNA-Binding ProteinsPPAR gammaProto-Oncogene ProteinsTET1 protein, mouseTet2 protein, mouse

Identifiers

PMID28100914
OpenAlexW2574240933

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.