Evidence map›Paper›PMID 28100213›Full record

ArticleBMC biotechnology2017

Transcriptomic response of wolf spider, Pardosa pseudoannulata, to transgenic rice expressing Bacillus thuringiensis Cry1Ab protein.

Juan Wang, Yuande Peng, Kaifu Xiao, Baoyang Wei, Jilin Hu, Zhi Wang, Qisheng Song, Xuguo Zhou

Open access · goldAbstract read
In one paragraph

Article in BMC biotechnology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Juan WangCollege of Bioscience and Bitechnology, Hunan Agriculture University, No1 Nongda Road, Changsha, 410128, Hunan, China.
Yuande PengInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, Hunan, 410205, China.
Kaifu XiaoCollege of Bioscience and Bitechnology, Hunan Agriculture University, No1 Nongda Road, Changsha, 410128, Hunan, China.
Baoyang WeiCollege of Bioscience and Bitechnology, Hunan Agriculture University, No1 Nongda Road, Changsha, 410128, Hunan, China.
Jilin HuCollege of Bioscience and Bitechnology, Hunan Agriculture University, No1 Nongda Road, Changsha, 410128, Hunan, China.
Zhi WangCollege of Bioscience and Bitechnology, Hunan Agriculture University, No1 Nongda Road, Changsha, 410128, Hunan, China. wangzhispider@hotmail.com.ORCID 0000-0002-0752-323X
Qisheng SongDivision of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA.
Xuguo ZhouDepartment of Entomology, University of Kentucky, Lexington, KY, USA.
Hunan Agricultural University · CNInstitute of Bast Fiber Crops · CNUniversity of Kentucky · USUniversity of Missouri · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBacillum thuringiensis (Bt) toxin produced in Cry1-expressing genetically modified rice (Bt rice) is highly effective to control lepidopteran pests, which reduces the needs for synthetic insecticides. Non-target organisms can be exposed to Bt toxins through direct feeding or trophic interactions in the field. The wolf spider Pardosa pseudoannulata, one of the dominant predators in South China, plays a crucial role in the rice agroecosystem. In this study, we investigated transcriptome responses of the 5th instar spiders fed on preys maintained on Bt- and non-Bt rice.

resultsComparative transcriptome analysis resulted in 136 differentially expressed genes (DEGs) between spiderlings preying upon N. lugens fed on Bt- and non-Bt rice (Bt- and non-Bt spiderlings). Functional analysis indicated a potential impact of Bt toxin on the formation of new cuticles during molting. GO and KEGG enrichment analyses suggested that GO terms associated with chitin or cuticle, including "chitin binding", "chitin metabolic process", "chitin synthase activity", "cuticle chitin biosynthetic process", "cuticle hydrocarbon biosynthetic process", and "structural constituent of cuticle", and an array of amino acid metabolic pathways, including "alanine, asparatate and glutamate metabolism", "glycine, serine and theronine metabolism", "cysteine and methionine metabolism", "tyrosine metabolism", "phenylalanine metabolism and phenylalanine", and "tyrosine and tryptophan biosynthesis" were significantly influenced in response to Cry1Ab.

conclusionsThe Cry1Ab may have a negative impact on the formation of new cuticles during molting, which is contributed to the delayed development of spiderlings. To validate these transcriptomic responses, further examination at the translational level will be warranted.

Indexed as

AnimalsBacillus thuringiensis ToxinsBacterial ProteinsEndotoxinsHemolysin ProteinsOryzaPest Control, BiologicalPlants, Genetically ModifiedSpidersTranscriptomeBacillus thuringiensis ToxinsBacterial ProteinsEndotoxinsHemolysin Proteinsinsecticidal crystal protein, Bacillus ThuringiensisChitinCry1AbCuticleDevelopmentPardosa pseudoannulataRNA-Seq

Identifiers

PMID28100213
PMCPMC5241980
OpenAlexW2573668988

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.