Evidence map›Paper›PMID 28100006›Full record

ArticleHepatology (Baltimore, Md.)2017

The fingerprint of antimitochondrial antibodies and the etiology of primary biliary cholangitis.

Zongwen Shuai, Jinjun Wang, Madhu Badamagunta, Jinjung Choi, Guoxiang Yang, Weici Zhang, Thomas P Kenny, Kathryn Guggenheim, Mark J Kurth, Aftab A Ansari and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Hepatology (Baltimore, Md.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 47 citations in OpenAlex.

  1. Pooled it
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  5. Review
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  7. Article
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  12. [Research progress of autoantibodies in primary biliary cholangitis].Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology · 2021
    Article
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  14. Review
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  16. Pathogen infections and primary biliary cholangitis.Clinical and experimental immunology · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 4 countries.

Zongwen ShuaiDepartment of Rheumatology and Immunology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Jinjun WangDivision of Rheumatology/Allergy and Clinical Immunology, University of California Davis School of Medicine, Davis, CA.
Madhu BadamaguntaDepartment of Molecular Medicine, University of California Davis School of Medicine, Davis, CA.
Jinjung ChoiDivision of Rheumatology/Allergy and Clinical Immunology, University of California Davis School of Medicine, Davis, CA.
Guoxiang YangDivision of Rheumatology/Allergy and Clinical Immunology, University of California Davis School of Medicine, Davis, CA.
Weici ZhangDivision of Rheumatology/Allergy and Clinical Immunology, University of California Davis School of Medicine, Davis, CA.
Thomas P KennyDivision of Rheumatology/Allergy and Clinical Immunology, University of California Davis School of Medicine, Davis, CA.
Kathryn GuggenheimDepartment of Chemistry, University of California Davis School of Medicine, Davis, CA.
Mark J KurthDepartment of Chemistry, University of California Davis School of Medicine, Davis, CA.
Aftab A AnsariDepartment of Pathology, Emory University School of Medicine, Atlanta, GA.
John VossDepartment of Molecular Medicine, University of California Davis School of Medicine, Davis, CA.
Ross L CoppelDepartment of Microbiology, Nursing and Health Sciences, Monash University, Clayton, Victoria, Australia.
Pietro InvernizziSection of Digestive Diseases, International Center for Digestive Health, Department of Medicine and Surgery, University of Milan-Bicocca, Monza, Italy.
Patrick S C LeungDivision of Rheumatology/Allergy and Clinical Immunology, University of California Davis School of Medicine, Davis, CA.
M Eric GershwinDivision of Rheumatology/Allergy and Clinical Immunology, University of California Davis School of Medicine, Davis, CA.
University of California, Davis · USEmory University · USMonash University · AUUniversity of Milano-Bicocca · IT

Funding

XENOBIOTICS AND PRIMARY BILIARY CIRRHOSISR01DK067003 · NIDDK · UNIVERSITY OF CALIFORNIA DAVIS · PI GERSHWIN, MERRILL E · 2003 to 2017
$4.4M
MECHANISMS AND PATHOGENESIS OF PRIMARY BILIARY CIRRHOSISR37DK039588 · NIDDK · UNIVERSITY OF CALIFORNIA DAVIS · PI GERSHWIN, MERRILL E · 2001 to 2010
$3.5M
MECHANISMS AND PATHOGENESIS OF PRIMARY BILIARY CIRRHOSISR01DK039588 · NIDDK · UNIVERSITY OF CALIFORNIA DAVIS · PI GERSHWIN, MERRILL E · 1988 to 2015
$2.0M
NIDDK NIH HHS R01 DK039588NIDDK NIH HHS R01 DK067003NIDDK NIH HHS R37 DK039588
6 · The paper itself

Abstract

The identification of environmental factors that lead to loss of tolerance has been coined the holy grail of autoimmunity. Our work has focused on the reactivity of antimitochondrial autoantibodies (AMA) to chemical xenobiotics and has hypothesized that a modified peptide within PDC-E2, the major mitochondrial autoantigen, will have been immunologically recognized at the time of loss of tolerance. Herein, we successfully applied intein technology to construct a PDC-E2 protein fragment containing amino acid residues 177-314 of PDC-E2 by joining a recombinant peptide spanning residues 177-252 (PDC-228) with a 62-residue synthetic peptide from 253 to 314 (PP), which encompasses PDC-E2 inner lipoyl domain (ILD). We named this intein-constructed fragment PPL. Importantly, PPL, as well as lipoic acid conjugated PPL (LA-PPL) and xenobiotic 2-octynoic acid conjugated PPL (2OA-PPL), are recognized by AMA. Of great importance, AMA has specificity for the 2OA-modified PDC-E2 ILD peptide backbone distinct from antibodies that react with native lipoylated PDC-E2 peptide. Interestingly, this unique AMA subfraction is of the immunoglobulin M isotype and more dominant in early-stage primary biliary cholangitis (PBC), suggesting that exposure to 2OA-PPL-like compounds occurs early in the generation of AMA. To understand the structural basis of this differential recognition, we analyzed PPL, LA-PPL, and 2OA-PPL using electron paramagnetic resonance spectroscopy, with confirmations by enzyme-linked immunosorbent assay, immunoblotting, and affinity antibody analysis. We demonstrate that the conformation of PDC-E2 ILD is altered when conjugated with 2OA, compared to conjugation with lipoic acid.

conclusionA molecular understanding of the conformation of xenobiotic-modified PDC-E2 is critical for understanding xenobiotic modification and loss of tolerance in PBC with widespread implications for a role of environmental chemicals in the induction of autoimmunity. (Hepatology 2017;65:1670-1682).

Indexed as

Antibody AffinityAutoantibodiesCase-Control StudiesCholangitisElectron Spin Resonance SpectroscopyEnzyme-Linked Immunosorbent AssayHumansInteinsMitochondriaPyruvate Dehydrogenase (Lipoamide)XenobioticsAutoantibodiesPyruvate Dehydrogenase (Lipoamide)Xenobiotics

Identifiers

PMID28100006
PMCPMC5397331
OpenAlexW2578217175

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.