Evidence map›Paper›PMID 28099013›Full record

ArticleThe journal of physical chemistry. B2017

Dynamic Nuclear Polarization Signal Enhancement with High-Affinity Biradical Tags.

Rivkah Rogawski, Ivan V Sergeyev, Yongjun Li, M Francesca Ottaviani, Virginia Cornish, Ann E McDermott

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 40 citations in OpenAlex.

  1. Targeted NMR signal enhancement of RNA by site-directed bis-nitroxide labeling.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Characterization of dielectric properties and their impact on MAS-DNP NMR applications.Journal of magnetic resonance (San Diego, Calif. : 1997) · 2024
    Article
  6. Review
  7. Stability of the nitroxide biradical AMUPol in intact and lysed mammalian cells.Journal of magnetic resonance (San Diego, Calif. : 1997) · 2022
    Article
  8. Review
  9. Site-specific dynamic nuclear polarization in a Gd(III)-labeled protein.Physical chemistry chemical physics : PCCP · 2020
    Article
  10. Article
  11. Targetable Tetrazine-Based Dynamic Nuclear Polarization Agents for Biological Systems.Chembiochem : a European journal of chemical biology · 2020
    Article
  12. Article
  13. Article
  14. High-sensitivity protein solid-state NMR spectroscopy.Current opinion in structural biology · 2019
    Review
  15. Article
  16. CombinedStructure (London, England : 1993) · 2018
    Article
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Rivkah RogawskiDepartment of Chemistry, Columbia University , New York, New York 10027, United States.ORCID 0000-0002-6438-2269
Ivan V SergeyevDepartment of Chemistry, Columbia University , New York, New York 10027, United States.
Yongjun LiDepartment of Chemistry, Columbia University , New York, New York 10027, United States.
M Francesca OttavianiDepartment of Pure and Applied Sciences, University of Urbino , Loc. Crocicchia, 61029 Urbino, Italy.ORCID 0000-0002-4681-4718
Virginia CornishDepartment of Chemistry, Columbia University , New York, New York 10027, United States.
Ann E McDermottDepartment of Chemistry, Columbia University , New York, New York 10027, United States.
Columbia University · USUniversity of Urbino · IT

Funding

TRAINING PROGRAM IN MOLECULAR BIOPHYSICST32GM008281 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI PALMER, ARTHUR G · 1988 to 2017
$5.4M
DYNAMIC NUCLEAR POLARIZATION SOLID STATE NMR SPECTROMETER FOR BIOMOLECULAR STUDIES10RR029249 · NCRR · NEW YORK STRUCTURAL BIOLOGY CENTER · PI MCDERMOTT, ANN E · 2010 to 2010
$2.3M
EXTRAMURAL RESEARCH FACILITIES CONSTRUCTIONC06RR015495 · NCRR · NEW YORK STRUCTURAL BIOLOGY CENTER · PI RIFKIND, RICHARD A · 2000 to 2000
$2.0M
NCRR NIH HHS C06 RR015495NCRR NIH HHS S10 RR029249NIGMS NIH HHS T32 GM008281
6 · The paper itself

Abstract

Dynamic nuclear polarization is an emerging technique for sensitizing solid-state NMR experiments by transferring polarization from electrons to nuclei. Stable biradicals, the polarization source for the cross effect mechanism, are typically codissolved at millimolar concentrations with proteins of interest. Here we describe the high-affinity biradical tag TMP-T, created by covalently linking trimethoprim, a nanomolar affinity ligand of dihydrofolate reductase (DHFR), to the biradical polarizing agent TOTAPOL. With TMP-T bound to DHFR, large enhancements of the protein spectrum are observed, comparable to when TOTAPOL is codissolved with the protein. In contrast to TOTAPOL, the tight binding TMP-T can be added stoichiometrically at radical concentrations orders of magnitude lower than in previously described preparations. Benefits of the reduced radical concentration include reduced spectral bleaching, reduced chemical perturbation of the sample, and the ability to selectively enhance signals for the protein of interest.

Indexed as

LigandsMagnetic Resonance SpectroscopyMolecular StructureTetrahydrofolate DehydrogenaseTrimethoprimLigandsTetrahydrofolate DehydrogenaseTrimethoprim

Identifiers

PMID28099013
PMCPMC5518711
OpenAlexW2577476584

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.