Evidence map›Paper›PMID 28097125›Full record

ArticleInternational journal of genomics2016

Bioinformatics Analysis of the Human Surfaceome Reveals New Targets for a Variety of Tumor Types.

André L Fonseca, Vandeclécio L da Silva, Marbella M da Fonsêca, Isabella T J Meira, Thayná E da Silva, José E Kroll, André M Ribeiro-Dos-Santos, Cléber R Freitas, Raimundo Furtado, Jorge E de Souza and 2 more

Open access · goldAbstract read
In one paragraph

Article in International journal of genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 18 citations in OpenAlex.

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  12. The in silico human surfaceome.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  13. Prospects for combined use of oncolytic viruses and CAR T-cells.Journal for immunotherapy of cancer · 2017
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

André L FonsecaBrain Institute, Federal University of Rio Grande do Norte, 59064-560 Natal, RN, Brazil; Ph.D. Program in Bioinformatics, Federal University of Rio Grande do Norte, Natal, RN, Brazil.
Vandeclécio L da SilvaBrain Institute, Federal University of Rio Grande do Norte, 59064-560 Natal, RN, Brazil; Ph.D. Program in Bioinformatics, Federal University of Rio Grande do Norte, Natal, RN, Brazil.
Marbella M da FonsêcaBrain Institute, Federal University of Rio Grande do Norte, 59064-560 Natal, RN, Brazil.
Isabella T J MeiraBrain Institute, Federal University of Rio Grande do Norte, 59064-560 Natal, RN, Brazil.
Thayná E da SilvaBrain Institute, Federal University of Rio Grande do Norte, 59064-560 Natal, RN, Brazil.
José E KrollBrain Institute, Federal University of Rio Grande do Norte, 59064-560 Natal, RN, Brazil; Institute of Bioinformatics and Biotechnology, Natal, RN, Brazil.
André M Ribeiro-Dos-SantosPh.D. Program in Genetics, Federal University of Para, Belém, PA, Brazil.
Cléber R FreitasBrain Institute, Federal University of Rio Grande do Norte, 59064-560 Natal, RN, Brazil.
Raimundo FurtadoBrain Institute, Federal University of Rio Grande do Norte, 59064-560 Natal, RN, Brazil.
Jorge E de SouzaDigital Metropolis Institute, Federal University of Rio Grande do Norte, Natal, RN, Brazil.
Beatriz StranskyBiomedical Engineering Department, Center of Technology, Federal University of Rio Grande do Norte, Natal, RN, Brazil.
Sandro J de SouzaBrain Institute, Federal University of Rio Grande do Norte, 59064-560 Natal, RN, Brazil.ORCID 0000-0002-1012-3237
Universidade Federal do Rio Grande do Norte · BRUniversidade Federal do Pará · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is estimated that 10 to 20% of all genes in the human genome encode cell surface proteins and due to their subcellular localization these proteins represent excellent targets for cancer diagnosis and therapeutics. Therefore, a precise characterization of the surfaceome set in different types of tumor is needed. Using TCGA data from 15 different tumor types and a new method to identify cancer genes, the

Identifiers

PMID28097125
PMCPMC5206789
OpenAlexW2556877281

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.