Evidence map›Paper›PMID 28095783›Full record

ArticleBMC genomics2017

Genome-wide expression profiling in muscle and subcutaneous fat of lambs in response to the intake of concentrate supplemented with vitamin E.

Laura González-Calvo, Elda Dervishi, Margalida Joy, Pilar Sarto, Roberto Martin-Hernandez, Magdalena Serrano, Jose M Ordovás, Jorge H Calvo

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 31 citations in OpenAlex.

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  10. Gene Expression and Fatty Acid Profiling inFrontiers in genetics · 2019
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Laura González-CalvoUnidad de Tecnología en Producción Animal, CITA, 59059, Zaragoza, Spain.
Elda DervishiUniversity of Alberta, 116 St and 85 Ave, Edmonton, AB, T6G 2R3, Canada.
Margalida JoyUnidad de Tecnología en Producción Animal, CITA, 59059, Zaragoza, Spain.
Pilar SartoUnidad de Tecnología en Producción Animal, CITA, 59059, Zaragoza, Spain.
Roberto Martin-HernandezIMDEA-Alimentación, 28049, Madrid, Spain.
Magdalena SerranoDepartamento de Mejora Genética Animal, INIA, 28040, Madrid, Spain.
Jose M OrdovásJean Mayer-USDA Human Nutrition Research Center on Aging at Tufts University, Boston, MA, USA.
Jorge H CalvoUnidad de Tecnología en Producción Animal, CITA, 59059, Zaragoza, Spain. jhcalvo@aragon.es.
Centro de Investigación y Tecnología Agroalimentaria de Aragón · ESFundacion Agencia Aragonesa para la Investigacion y el Desarrollo · ESIMDEA Food · ESTufts University · USUniversity of Alberta · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe objective of this study was to acquire a broader, more comprehensive picture of the transcriptional changes in the L. Thoracis muscle (LT) and subcutaneous fat (SF) of lambs supplemented with vitamin E. Furthermore, we aimed to identify novel genes involved in the metabolism of vitamin E that might also be involved in meat quality. In the first treatment, seven lambs were fed a basal concentrate from weaning to slaughter (CON). In the second treatment, seven lambs received basal concentrate from weaning to 4.71 ± 2.62 days and thereafter concentrate supplemented with 500 mg dl-α-tocopheryl acetate/kg (VE) during the last 33.28 ± 1.07 days before slaughter.

resultsThe addition of vitamin E to the diet increased the α-tocopherol muscle content and drastically diminished the lipid oxidation of meat. Gene expression profiles for treatments VE and CON were clearly separated from each other in the LT and SF. Vitamin E supplementation had a dramatic effect on subcutaneous fat gene expression, showing general up-regulation of significant genes, compared to CON treatment. In LT, vitamin E supplementation caused down-regulation of genes related to intracellular signaling cascade. Functional analysis of SF showed that vitamin E supplementation caused up-regulation of the lipid biosynthesis process, cholesterol, and sterol and steroid biosynthesis, and it down-regulated genes related to the stress response.

conclusionsDifferent gene expression patterns were found between the SF and LT, suggesting tissue specific responses to vitamin E supplementation. Our study enabled us to identify novel genes and metabolic pathways related to vitamin E metabolism that might be implicated in meat quality. Further exploration of these genes and vitamin E could lead to a better understanding of how vitamin E affects the oxidative process that occurs in manufactured meat products.

Indexed as

GenomeAnimalsCluster AnalysisDietary SupplementsDiscriminant AnalysisDown-RegulationLeast-Squares AnalysisLipid MetabolismMaleMetmyoglobinMuscle, SkeletalNucleic Acid HybridizationOligonucleotide Array Sequence AnalysisPrincipal Component AnalysisReal-Time Polymerase Chain ReactionRNAMetmyoglobinRNAVitamin EGenome-wide expression profilingMeat qualityMicroarrayMusclemSheepSubcutaneous fatVitamin E

Identifiers

PMID28095783
PMCPMC5240399
OpenAlexW2571699330

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.